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504 lines
16 KiB
Markdown
504 lines
16 KiB
Markdown
<!--
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Copyright (c) ONNX Project Contributors
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SPDX-License-Identifier: Apache-2.0
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-->
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# Python API Overview
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The full API is described at [API Reference](https://onnx.ai/onnx/api).
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## Loading an ONNX Model
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```python
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import onnx
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# onnx_model is an in-memory ModelProto
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onnx_model = onnx.load("path/to/the/model.onnx")
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```
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## Loading an ONNX Model with External Data
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* If the external data is under the same directory of the model, simply use `onnx.load()`
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```python
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import onnx
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onnx_model = onnx.load("path/to/the/model.onnx")
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```
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* If the external data is under another directory, use `load_external_data_for_model()` to specify the directory path and load after using `onnx.load()`
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```python
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import onnx
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from onnx.external_data_helper import load_external_data_for_model
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onnx_model = onnx.load("path/to/the/model.onnx", load_external_data=False)
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load_external_data_for_model(onnx_model, "data/directory/path/")
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# Then the onnx_model has loaded the external data from the specific directory
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```
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## Converting an ONNX Model to External Data
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```python
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from onnx.external_data_helper import convert_model_to_external_data
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# onnx_model is an in-memory ModelProto
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onnx_model = ...
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convert_model_to_external_data(onnx_model, all_tensors_to_one_file=True, location="filename", size_threshold=1024, convert_attribute=False)
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# Then the onnx_model has converted raw data as external data
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# Must be followed by save
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```
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## Saving an ONNX Model
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```python
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import onnx
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# onnx_model is an in-memory ModelProto
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onnx_model = ...
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# Save the ONNX model
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onnx.save(onnx_model, "path/to/the/model.onnx")
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```
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## Converting and Saving an ONNX Model to External Data
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```python
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import onnx
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# onnx_model is an in-memory ModelProto
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onnx_model = ...
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onnx.save_model(onnx_model, "path/to/save/the/model.onnx", save_as_external_data=True, all_tensors_to_one_file=True, location="filename", size_threshold=1024, convert_attribute=False)
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# Then the onnx_model has converted raw data as external data and saved to specific directory
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```
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## Manipulating TensorProto and Numpy Array
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```{eval-rst}
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.. exec_code::
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import numpy
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import onnx
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from onnx import numpy_helper
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# Preprocessing: create a Numpy array
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numpy_array = numpy.array([[1.0, 2.0, 3.0], [4.0, 5.0, 6.0]], dtype=float)
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print(f"Original Numpy array:\n{numpy_array}\n")
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# Convert the Numpy array to a TensorProto
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tensor = numpy_helper.from_array(numpy_array)
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print(f"TensorProto:\n{tensor}")
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# Convert the TensorProto to a Numpy array
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new_array = numpy_helper.to_array(tensor)
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print(f"After round trip, Numpy array:\n{new_array}\n")
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# Save the TensorProto
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with open("tensor.pb", "wb") as f:
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f.write(tensor.SerializeToString())
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# Load a TensorProto
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new_tensor = onnx.TensorProto()
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with open("tensor.pb", "rb") as f:
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new_tensor.ParseFromString(f.read())
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print(f"After saving and loading, new TensorProto:\n{new_tensor}")
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from onnx import TensorProto, helper
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# Conversion utilities for mapping attributes in ONNX IR
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# The functions below are available after ONNX 1.13
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np_dtype = helper.tensor_dtype_to_np_dtype(TensorProto.FLOAT)
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print(f"The converted numpy dtype for {helper.tensor_dtype_to_string(TensorProto.FLOAT)} is {np_dtype}.")
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storage_dtype = helper.tensor_dtype_to_storage_tensor_dtype(TensorProto.FLOAT)
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print(f"The storage dtype for {helper.tensor_dtype_to_string(TensorProto.FLOAT)} is {helper.tensor_dtype_to_string(storage_dtype)}.")
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field_name = helper.tensor_dtype_to_field(TensorProto.FLOAT)
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print(f"The field name for {helper.tensor_dtype_to_string(TensorProto.FLOAT)} is {field_name}.")
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tensor_dtype = helper.np_dtype_to_tensor_dtype(np_dtype)
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print(f"The tensor data type for numpy dtype: {np_dtype} is {helper.tensor_dtype_to_string(tensor_dtype)}.")
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for tensor_dtype in helper.get_all_tensor_dtypes():
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print(helper.tensor_dtype_to_string(tensor_dtype))
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```
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## Creating an ONNX Model Using Helper Functions
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```{eval-rst}
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.. exec_code::
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import onnx
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from onnx import helper, TensorProto
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# Create inputs and output value info
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X = helper.make_tensor_value_info("X", TensorProto.FLOAT, [3, 2])
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pads = helper.make_tensor_value_info("pads", TensorProto.INT64, [4])
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Y = helper.make_tensor_value_info("Y", TensorProto.FLOAT, [5, 4])
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# Create Pad node
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node_def = helper.make_node(
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"Pad",
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inputs=["X", "pads"],
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outputs=["Y"],
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mode="constant",
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)
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# Build graph and model
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graph_def = helper.make_graph(
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[node_def],
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"test-model",
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[X, pads],
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[Y],
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)
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model_def = helper.make_model(
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graph_def,
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producer_name="onnx-example",
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opset_imports=[helper.make_opsetid("", 11)]
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)
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# Validate the model
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onnx.checker.check_model(model_def)
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print("Model is valid!")
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```
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## Conversion utilities for mapping attributes in ONNX IR
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```{eval-rst}
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.. exec_code::
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from onnx import TensorProto, helper
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np_dtype = helper.tensor_dtype_to_np_dtype(TensorProto.FLOAT)
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print(f"The converted numpy dtype for {helper.tensor_dtype_to_string(TensorProto.FLOAT)} is {np_dtype}.")
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field_name = helper.tensor_dtype_to_field(TensorProto.FLOAT)
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print(f"The field name for {helper.tensor_dtype_to_string(TensorProto.FLOAT)} is {field_name}.")
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# There are other useful conversion utilities. Please check onnx.helper
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```
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## Checking an ONNX Model
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```python
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import onnx
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# Preprocessing: load the ONNX model
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model_path = "path/to/the/model.onnx"
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onnx_model = onnx.load(model_path)
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print(f"The model is:\n{onnx_model}")
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# Check the model
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try:
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onnx.checker.check_model(onnx_model)
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except onnx.checker.ValidationError as e:
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print(f"The model is invalid: {e}")
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else:
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print("The model is valid!")
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```
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### Checking a Large ONNX Model >2GB
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Current checker supports checking models with external data, but for those models larger than 2GB, please use the model path for onnx.checker and the external data needs to be under the same directory.
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```python
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import onnx
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onnx.checker.check_model("path/to/the/model.onnx")
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# onnx.checker.check_model(loaded_onnx_model) will fail if given >2GB model
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```
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## Running Shape Inference on an ONNX Model
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```{eval-rst}
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.. exec_code::
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import onnx
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from onnx import helper, shape_inference
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from onnx import TensorProto
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# Preprocessing: create a model with two nodes, Y's shape is unknown
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node1 = helper.make_node("Transpose", ["X"], ["Y"], perm=[1, 0, 2])
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node2 = helper.make_node("Transpose", ["Y"], ["Z"], perm=[1, 0, 2])
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graph = helper.make_graph(
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[node1, node2],
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"two-transposes",
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[helper.make_tensor_value_info("X", TensorProto.FLOAT, (2, 3, 4))],
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[helper.make_tensor_value_info("Z", TensorProto.FLOAT, (2, 3, 4))],
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)
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original_model = helper.make_model(graph, producer_name="onnx-examples")
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# Check the model and print Y's shape information
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onnx.checker.check_model(original_model)
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print(f"Before shape inference, the shape info of Y is:\n{original_model.graph.value_info}")
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# Apply shape inference on the model
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inferred_model = shape_inference.infer_shapes(original_model)
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# Check the model and print Y's shape information
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onnx.checker.check_model(inferred_model)
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print(f"After shape inference, the shape info of Y is:\n{inferred_model.graph.value_info}")
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```
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### Shape inference a Large ONNX Model >2GB
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Current shape_inference supports models with external data, but for those models larger than 2GB, please use the model path for onnx.shape_inference.infer_shapes_path and the external data needs to be under the same directory. You can specify the output path for saving the inferred model; otherwise, the default output path is same as the original model path.
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```python
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import onnx
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# output the inferred model to the original model path
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onnx.shape_inference.infer_shapes_path("path/to/the/model.onnx")
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# output the inferred model to the specified model path
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onnx.shape_inference.infer_shapes_path("path/to/the/model.onnx", "output/inferred/model.onnx")
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# inferred_model = onnx.shape_inference.infer_shapes(loaded_onnx_model) will fail if given >2GB model
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```
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## Running Type Inference on an ONNX Function
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```{eval-rst}
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.. exec_code::
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import onnx
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import onnx.helper
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import onnx.parser
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import onnx.shape_inference
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function_text = """
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<opset_import: [ "" : 18 ], domain: "local">
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CastTo <dtype> (x) => (y) {
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y = Cast <to : int = @dtype> (x)
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}
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"""
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function = onnx.parser.parse_function(function_text)
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# The function above has one input-parameter x, and one attribute-parameter dtype.
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# To apply type-and-shape-inference to this function, we must supply the type of
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# input-parameter and an attribute value for the attribute-parameter as below:
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float_type_ = onnx.helper.make_tensor_type_proto(1, None)
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dtype_6 = onnx.helper.make_attribute("dtype", 6)
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result = onnx.shape_inference.infer_function_output_types(
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function, [float_type_], [dtype_6]
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)
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print(result) # a list containing the (single) output type
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```
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## Converting Version of an ONNX Model within Default Domain (""/"ai.onnx")
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```python
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import onnx
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from onnx import version_converter, helper
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# Preprocessing: load the model to be converted.
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model_path = "path/to/the/model.onnx"
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original_model = onnx.load(model_path)
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print(f"The model before conversion:\n{original_model}")
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# A full list of supported adapters can be found here:
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# https://github.com/onnx/onnx/blob/main/onnx/version_converter.py#L21
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# Apply the version conversion on the original model
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converted_model = version_converter.convert_version(original_model, <int target_version>)
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print(f"The model after conversion:\n{converted_model}")
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```
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## Utility Functions
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### Extracting Sub-model with Inputs Outputs Tensor Names
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Function `extract_model()` extracts sub-model from an ONNX model.
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The sub-model is defined by the names of the input and output tensors *exactly*.
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```python
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import onnx
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input_path = "path/to/the/original/model.onnx"
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output_path = "path/to/save/the/extracted/model.onnx"
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input_names = ["input_0", "input_1", "input_2"]
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output_names = ["output_0", "output_1"]
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onnx.utils.extract_model(input_path, output_path, input_names, output_names)
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```
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Note: For control-flow operators, e.g. If and Loop, the *boundary of sub-model*,
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which is defined by the input and output tensors, should not *cut through* the
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subgraph that is connected to the *main graph* as attributes of these operators.
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### ONNX Compose
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`onnx.compose` module provides tools to create combined models.
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`onnx.compose.merge_models` can be used to merge two models, by connecting some of the outputs
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from the first model with inputs from the second model. By default, inputs/outputs not present in the
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`io_map` argument will remain as inputs/outputs of the combined model.
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In this example we merge two models by connecting each output of the first model to an input in the second. The resulting model will have the same inputs as the first model and the same outputs as the second:
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```python
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import onnx
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model1 = onnx.load("path/to/model1.onnx")
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# agraph (float[N] A, float[N] B) => (float[N] C, float[N] D)
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# {
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# C = Add(A, B)
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# D = Sub(A, B)
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# }
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model2 = onnx.load("path/to/model2.onnx")
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# agraph (float[N] X, float[N] Y) => (float[N] Z)
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# {
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# Z = Mul(X, Y)
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# }
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combined_model = onnx.compose.merge_models(
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model1, model2,
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io_map=[("C", "X"), ("D", "Y")]
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)
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```
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Additionally, a user can specify a list of `inputs`/`outputs` to be included in the combined model,
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effectively dropping the part of the graph that does't contribute to the combined model outputs.
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In the following example, we are connecting only one of the two outputs in the first model
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to both inputs in the second. By specifying the outputs of the combined model explicitly, we are dropping the output not consumed from the first model, and the relevant part of the graph:
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```python
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import onnx
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# Default case. Include all outputs in the combined model
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combined_model = onnx.compose.merge_models(
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model1, model2,
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io_map=[("C", "X"), ("C", "Y")],
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) # outputs: "D", "Z"
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# Explicit outputs. "Y" output and the Sub node are not present in the combined model
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combined_model = onnx.compose.merge_models(
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model1, model2,
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io_map=[("C", "X"), ("C", "Y")],
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outputs=["Z"],
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) # outputs: "Z"
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```
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`onnx.compose.add_prefix` allows you to add a prefix to names in the model, to avoid a name collision
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when merging them. By default, it renames all names in the graph: inputs, outputs, edges, nodes,
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initializers, sparse initializers and value infos.
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```python
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import onnx
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model = onnx.load("path/to/the/model.onnx")
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# model - outputs: ["out0", "out1"], inputs: ["in0", "in1"]
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new_model = onnx.compose.add_prefix(model, prefix="m1/")
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# new_model - outputs: ["m1/out0", "m1/out1"], inputs: ["m1/in0", "m1/in1"]
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# Can also be run in-place
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onnx.compose.add_prefix(model, prefix="m1/", inplace=True)
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```
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`onnx.compose.expand_out_dim` can be used to connect models that expect a different number
|
|
of dimensions by inserting dimensions with extent one. This can be useful, when combining a
|
|
model producing samples with a model that works with batches of samples.
|
|
|
|
```python
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|
import onnx
|
|
|
|
# outputs: "out0", shape=[200, 200, 3]
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|
model1 = onnx.load("path/to/the/model1.onnx")
|
|
|
|
# outputs: "in0", shape=[N, 200, 200, 3]
|
|
model2 = onnx.load("path/to/the/model2.onnx")
|
|
|
|
# outputs: "out0", shape=[1, 200, 200, 3]
|
|
new_model1 = onnx.compose.expand_out_dims(model1, dim_idx=0)
|
|
|
|
# Models can now be merged
|
|
combined_model = onnx.compose.merge_models(
|
|
new_model1, model2, io_map=[("out0", "in0")]
|
|
)
|
|
|
|
# Can also be run in-place
|
|
onnx.compose.expand_out_dims(model1, dim_idx=0, inplace=True)
|
|
```
|
|
|
|
## Tools
|
|
|
|
### Updating Model"s Inputs Outputs Dimension Sizes with Variable Length
|
|
|
|
Function `update_inputs_outputs_dims` updates the dimension of the inputs and outputs of the model,
|
|
to the provided values in the parameter. You could provide both static and dynamic dimension size,
|
|
by using dim_param. For more information on static and dynamic dimension size, checkout [Tensor Shapes](IR.md#tensor-shapes).
|
|
|
|
The function runs model checker after the input/output sizes are updated.
|
|
|
|
```python
|
|
import onnx
|
|
from onnx.tools import update_model_dims
|
|
|
|
model = onnx.load("path/to/the/model.onnx")
|
|
# Here both "seq", "batch" and -1 are dynamic using dim_param.
|
|
variable_length_model = update_model_dims.update_inputs_outputs_dims(model, {"input_name": ["seq", "batch", 3, -1]}, {"output_name": ["seq", "batch", 1, -1]})
|
|
```
|
|
|
|
## ONNX Parser
|
|
|
|
Functions `onnx.parser.parse_model` and `onnx.parser.parse_graph` can be used to create an ONNX model
|
|
or graph from a textual representation as shown below. See [Language Syntax](Syntax.md) for more details
|
|
about the language syntax.
|
|
|
|
```{eval-rst}
|
|
.. exec_code::
|
|
|
|
import onnx
|
|
|
|
input = """
|
|
agraph (float[N, 128] X, float[128, 10] W, float[10] B) => (float[N, 10] C)
|
|
{
|
|
T = MatMul(X, W)
|
|
S = Add(T, B)
|
|
C = Softmax(S)
|
|
}
|
|
"""
|
|
graph = onnx.parser.parse_graph(input)
|
|
print(f"Graph name: {graph.name}")
|
|
print(f"Graph nodes: {[n.op_type for n in graph.node]}")
|
|
|
|
input = """
|
|
<
|
|
ir_version: 7,
|
|
opset_import: ["" : 10]
|
|
>
|
|
agraph (float[N, 128] X, float[128, 10] W, float[10] B) => (float[N, 10] C)
|
|
{
|
|
T = MatMul(X, W)
|
|
S = Add(T, B)
|
|
C = Softmax(S)
|
|
}
|
|
"""
|
|
model = onnx.parser.parse_model(input)
|
|
print(f"Model IR version: {model.ir_version}")
|
|
print(f"Model graph: {model.graph.name}")
|
|
```
|
|
|
|
## ONNX Inliner
|
|
|
|
Functions `onnx.inliner.inline_local_functions` and `inline_selected_functions` can be used
|
|
to inline model-local functions in an ONNX model. In particular, `inline_local_functions` can
|
|
be used to produce a function-free model (suitable for backends that do not handle or support
|
|
functions). On the other hand, `inline_selected_functions` can be used to inline selected
|
|
functions. There is no support yet for inlining ONNX standard ops that are functions (also known
|
|
as schema-defined functions).
|
|
|
|
```python
|
|
import onnx
|
|
import onnx.inliner
|
|
|
|
model = onnx.load("path/to/the/model.onnx")
|
|
inlined = onnx.inliner.inline_local_functions(model)
|
|
onnx.save("path/to/the/inlinedmodel.onnx")
|
|
```
|