183 lines
5.2 KiB
C++
183 lines
5.2 KiB
C++
/**
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* Copyright (c) 2021 by Contributors
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* @file runtime/container.h
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* @brief Defines the container object data structures.
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*/
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#ifndef DGL_RUNTIME_PARALLEL_FOR_H_
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#define DGL_RUNTIME_PARALLEL_FOR_H_
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#include <dgl/env_variable.h>
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#include <dmlc/omp.h>
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#include <algorithm>
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#include <atomic>
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#include <cstdlib>
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#include <exception>
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#include <string>
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#include <utility>
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#include <vector>
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namespace {
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int64_t divup(int64_t x, int64_t y) { return (x + y - 1) / y; }
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} // namespace
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namespace dgl {
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namespace runtime {
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namespace {
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struct DefaultGrainSizeT {
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size_t grain_size;
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DefaultGrainSizeT() : DefaultGrainSizeT(1) {}
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explicit DefaultGrainSizeT(size_t default_grain_size) {
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auto var = dgl::kDGLParallelForGrainSize;
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if (var) {
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grain_size = std::stoul(var);
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} else {
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grain_size = default_grain_size;
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}
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}
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size_t operator()() { return grain_size; }
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};
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} // namespace
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inline size_t compute_num_threads(size_t begin, size_t end, size_t grain_size) {
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#ifdef _OPENMP
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if (omp_in_parallel() || end - begin <= grain_size || end - begin == 1)
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return 1;
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return std::min(
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static_cast<int64_t>(omp_get_max_threads()),
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divup(end - begin, grain_size));
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#else
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return 1;
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#endif
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}
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static DefaultGrainSizeT default_grain_size;
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/**
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* @brief OpenMP-based parallel for loop.
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*
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* It requires each thread's workload to have at least \a grain_size elements.
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* The loop body will be a function that takes in two arguments \a begin and \a
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* end, which stands for the starting (inclusive) and ending index (exclusive)
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* of the workload.
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*/
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template <typename F>
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void parallel_for(
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const size_t begin, const size_t end, const size_t grain_size, F&& f) {
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if (begin >= end) {
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return;
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}
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#ifdef _OPENMP
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auto num_threads = compute_num_threads(begin, end, grain_size);
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// (BarclayII) the exception code is borrowed from PyTorch.
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std::atomic_flag err_flag = ATOMIC_FLAG_INIT;
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std::exception_ptr eptr;
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#pragma omp parallel num_threads(num_threads)
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{
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auto tid = omp_get_thread_num();
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auto chunk_size = divup((end - begin), num_threads);
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auto begin_tid = begin + tid * chunk_size;
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if (begin_tid < end) {
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auto end_tid = std::min(end, static_cast<size_t>(chunk_size + begin_tid));
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try {
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f(begin_tid, end_tid);
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} catch (...) {
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if (!err_flag.test_and_set()) eptr = std::current_exception();
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}
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}
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}
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if (eptr) std::rethrow_exception(eptr);
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#else
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f(begin, end);
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#endif
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}
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/**
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* @brief OpenMP-based parallel for loop with default grain size.
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*
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* parallel_for with grain size to default value, either 1 or controlled through
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* environment variable DGL_PARALLEL_FOR_GRAIN_SIZE.
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* If grain size is set to 1, the function behaves the same way as OpenMP
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* parallel for pragma with static scheduling.
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*/
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template <typename F>
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void parallel_for(const size_t begin, const size_t end, F&& f) {
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parallel_for(begin, end, default_grain_size(), std::forward<F>(f));
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}
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/**
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* @brief OpenMP-based two-stage parallel reduction.
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*
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* The first-stage reduction function \a f works in parallel. Each thread's
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* workload has at least \a grain_size elements. The loop body will be a
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* function that takes in the starting index (inclusive), the ending index
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* (exclusive), and the reduction identity.
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*
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* The second-stage reduction function \a sf is a binary function working in the
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* main thread. It aggregates the partially reduced result computed from each
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* thread.
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*
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* Example to compute a parallelized max reduction of an array \c a:
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*
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* parallel_reduce(
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* 0, // starting index
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* 100, // ending index
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* 1, // grain size
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* -std::numeric_limits<float>::infinity, // identity
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* [&a] (int begin, int end, float ident) { // first-stage partial
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* reducer float result = ident; for (int i = begin; i < end; ++i) result =
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* std::max(result, a[i]); return result;
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* },
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* [] (float result, float partial_result) {
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* return std::max(result, partial_result);
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* });
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*/
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template <typename DType, typename F, typename SF>
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DType parallel_reduce(
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const size_t begin, const size_t end, const size_t grain_size,
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const DType ident, const F& f, const SF& sf) {
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if (begin >= end) {
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return ident;
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}
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int num_threads = compute_num_threads(begin, end, grain_size);
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if (num_threads == 1) {
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return f(begin, end, ident);
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}
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std::vector<DType> results(num_threads, ident);
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std::atomic_flag err_flag = ATOMIC_FLAG_INIT;
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std::exception_ptr eptr;
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#pragma omp parallel num_threads(num_threads)
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{
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auto tid = omp_get_thread_num();
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auto chunk_size = divup((end - begin), num_threads);
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auto begin_tid = begin + tid * chunk_size;
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if (begin_tid < end) {
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auto end_tid = std::min(end, static_cast<size_t>(chunk_size + begin_tid));
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try {
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results[tid] = f(begin_tid, end_tid, ident);
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} catch (...) {
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if (!err_flag.test_and_set()) eptr = std::current_exception();
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}
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}
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}
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if (eptr) std::rethrow_exception(eptr);
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DType out = ident;
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for (int64_t i = 0; i < num_threads; ++i) out = sf(out, results[i]);
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return out;
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}
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} // namespace runtime
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} // namespace dgl
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#endif // DGL_RUNTIME_PARALLEL_FOR_H_
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