24 lines
1.4 KiB
Markdown
24 lines
1.4 KiB
Markdown
# Connectors
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## How tool references work
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Plugin files use `~~category` as a placeholder for whatever tool the user connects in that category. For example, `~~literature` might mean PubMed, bioRxiv, or any other literature source with an MCP server.
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Plugins are **tool-agnostic** — they describe workflows in terms of categories (literature, clinical trials, chemical database, etc.) rather than specific products. The `.mcp.json` pre-configures specific MCP servers, but any MCP server in that category works.
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## Connectors for this plugin
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| Category | Placeholder | Included servers | Other options |
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|----------|-------------|-----------------|---------------|
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| Literature | `~~literature` | PubMed, bioRxiv, Consensus | Google Scholar, Semantic Scholar |
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| Scientific illustration | `~~scientific illustration` | BioRender | — |
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| Clinical trials | `~~clinical trials` | ClinicalTrials.gov | EU Clinical Trials Register |
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| Chemical database | `~~chemical database` | ChEMBL | PubChem, DrugBank |
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| Drug targets | `~~drug targets` | Open Targets | UniProt, STRING |
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| Data repository | `~~data repository` | Synapse | Zenodo, Dryad, Figshare |
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| Journal access | `~~journal access` | Wiley Scholar Gateway | Elsevier, Springer Nature |
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| AI research | `~~AI research` | Owkin | — |
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| Lab platform | `~~lab platform` | Benchling\* | — |
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\* Placeholder — MCP URL not yet configured
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