wehub-resource-sync
4b6817381b
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17 lines
385 B
Python
17 lines
385 B
Python
import os
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PIPELINE_NAME = os.getenv("PIPELINE_NAME", "bioinformatics_variant_pipeline")
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PIPELINE_RUN_ID = os.getenv("PIPELINE_RUN_ID", "default")
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PIPELINE_STAGE = os.getenv("PIPELINE_STAGE", "ingest")
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# Fields every variant record must have
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REQUIRED_FIELDS = [
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"sample_id",
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"gene",
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"chromosome",
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"position",
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"ref_allele",
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"alt_allele",
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"quality_score",
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]
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