437 lines
14 KiB
Python
437 lines
14 KiB
Python
# Copyright (c) 2020 PaddlePaddle Authors. All Rights Reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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from __future__ import annotations
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import warnings
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from collections.abc import Iterator
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from typing import (
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TYPE_CHECKING,
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Any,
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Generic,
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TypeVar,
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)
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import numpy as np
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from ...framework import core
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from ...tensor import randperm
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if TYPE_CHECKING:
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from collections.abc import Generator, Sequence, Sized
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import numpy.typing as npt
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from paddle import Tensor
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_T = TypeVar("_T")
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class Sampler(Generic[_T]):
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"""
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An abstract class to encapsulate methods and behaviors of samplers.
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All sampler used by :code:`paddle.io.BatchSampler` should be a subclass
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of :code:`paddle.io.Sampler`, BatchSampler subclasses should
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implement following methods:
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:code:`__iter__`: return sample index iterably, which iterate over indices
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of dataset elements
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:code:`__len__`: the number of sample in :attr:`data_source`
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Args:
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data_source(Dataset, optional): this could be an instance of
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:code:`paddle.io.Dataset` other Python object which
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implemented :code:`__len__` for Sampler to get indices
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as the range of :attr:`dataset` length. Default None.
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Returns:
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Sampler: an iterable object for sample indices iterating
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Examples:
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.. code-block:: pycon
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>>> import numpy as np
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>>> from paddle.io import Dataset, Sampler
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>>> class RandomDataset(Dataset): # type: ignore[type-arg]
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... def __init__(self, num_samples):
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... self.num_samples = num_samples
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...
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... def __getitem__(self, idx):
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... image = np.random.random([784]).astype('float32')
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... label = np.random.randint(0, 9, (1,)).astype('int64')
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... return image, label
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...
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... def __len__(self):
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... return self.num_samples
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>>> class MySampler(Sampler): # type: ignore[type-arg]
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... def __init__(self, data_source):
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... self.data_source = data_source
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...
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... def __iter__(self):
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... return iter(range(len(self.data_source))) # type: ignore[arg-type]
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...
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... def __len__(self):
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... return len(self.data_source) # type: ignore[arg-type]
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>>> sampler = MySampler(data_source=RandomDataset(100))
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>>> for index in sampler:
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... print(index)
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0
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1
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2
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...
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99
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see `paddle.io.BatchSampler`
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see `paddle.io.DataLoader`
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"""
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data_source: Sized | None
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def __init__(self, data_source: Sized | None = None) -> None:
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self.data_source = data_source
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def __iter__(self) -> Iterator[_T]:
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raise NotImplementedError
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# Not define __len__ method in this base class here for __len__
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# is not needed in same sense, e.g. paddle.io.IterableDataset
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if TYPE_CHECKING:
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def __len__(self) -> int: ...
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class SequenceSampler(Sampler[int]):
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"""
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Iterate samples sequentially, yield :code:`0, 1, 2, ..., len(data_source) -1`
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generally,
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Args:
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data_source(Dataset): dataset to sample, this could be an
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instance of :code:`paddle.io.Dataset` other Python
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object which implemented :code:`__len__`.
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Returns:
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Sampler: a Sampler yield sample index sequentially
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Examples:
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.. code-block:: pycon
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>>> import numpy as np
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>>> from paddle.io import Dataset, SequenceSampler
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>>> class RandomDataset(Dataset): # type: ignore[type-arg]
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... def __init__(self, num_samples):
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... self.num_samples = num_samples
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...
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... def __getitem__(self, idx):
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... image = np.random.random([784]).astype('float32')
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... label = np.random.randint(0, 9, (1,)).astype('int64')
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... return image, label
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...
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... def __len__(self):
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... return self.num_samples
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>>> sampler = SequenceSampler(data_source=RandomDataset(100))
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>>> for index in sampler:
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... print(index)
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0
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1
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2
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...
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99
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see `paddle.io.Sampler`
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"""
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data_source: Sized
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def __init__(self, data_source: Sized) -> None:
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self.data_source = data_source
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def __iter__(self) -> Iterator[int]:
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return iter(range(len(self.data_source)))
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def __len__(self) -> int:
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return len(self.data_source)
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class RandomSampler(Sampler[int]):
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"""
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Iterate samples randomly, yield shuffled indices, if :attr:`replacement=False`,
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yield shuffled indices of the whole data source, if :attr:`replacement=True`,
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:attr:`num_samples` can set to specify the sample number to draw.
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Args:
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data_source(Dataset): dataset to sample, this could be an
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instance of :ref:`api_paddle_io_Dataset` or :ref:`api_paddle_io_IterableDataset` or other Python
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object which implemented :code:`__len__` to get indices as the range of :code:`dataset` length. Default None.
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replacement(bool, optional): If False, sample the whole dataset, If True,
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set :attr:`num_samples` for how many samples to draw. Default False.
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num_samples(int, optional): set sample number to draw. Default None, which is set to the length of `data_source`.
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generator(Generator, optional): specify a generator to sample the :code:`data_source`. Default None, disabled.
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Returns:
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RandomSampler: a Sampler yield sample index randomly.
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Examples:
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.. code-block:: pycon
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>>> import numpy as np
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>>> from paddle.io import Dataset, RandomSampler
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>>> np.random.seed(2023)
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>>> class RandomDataset(Dataset): # type: ignore[type-arg]
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... def __init__(self, num_samples):
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... self.num_samples = num_samples
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...
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... def __getitem__(self, idx):
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... image = np.random.random([784]).astype('float32')
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... label = np.random.randint(0, 9, (1,)).astype('int64')
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... return image, label
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...
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... def __len__(self):
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... return self.num_samples
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>>> sampler = RandomSampler(data_source=RandomDataset(100))
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>>> for index in sampler:
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... print(index)
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56
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12
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68
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...
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87
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"""
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data_source: Sized
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replacement: bool
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generator: Generator[int, None, None] | None
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def __init__(
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self,
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data_source: Sized,
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replacement: bool = False,
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num_samples: int | None = None,
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generator: Generator[int, None, None] | None = None,
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) -> None:
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self.data_source = data_source
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self.replacement = replacement
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self._num_samples = num_samples
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if isinstance(generator, Iterator):
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self.generator = generator
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else:
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warnings.warn(
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"the specified generator is not iterable and will be ignored"
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)
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self.generator = None
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if not isinstance(self.replacement, bool):
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raise TypeError(
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"expect boolean value for replacement, but got "
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f"replacement={self.replacement}"
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)
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if not self.replacement and self.num_samples > len(self.data_source):
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raise ValueError(
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"num_samples should be smaller than or equal to length of data_source when replacement is False, "
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f"but got num_samples: {self.num_samples} > data_source: {len(self.data_source)}"
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)
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if not isinstance(self.num_samples, int) or self.num_samples <= 0:
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raise ValueError(
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"num_samples should be a positive integer, "
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f"but got num_samples={self.num_samples}"
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)
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@property
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def num_samples(self) -> int:
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if self._num_samples is None:
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return len(self.data_source)
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return self._num_samples
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def __iter__(self) -> Iterator[int]:
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n = len(self.data_source)
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if self.generator:
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for i in range(self.num_samples):
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try:
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index = next(self.generator)
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except StopIteration:
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return
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yield index
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else:
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if self.replacement:
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for index in np.random.choice(
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np.arange(n), self.num_samples, replace=True
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).tolist():
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yield index
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else:
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for index in np.random.choice(
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np.arange(n), self.num_samples, replace=False
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).tolist():
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yield index
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def __len__(self) -> int:
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return self.num_samples
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def _weighted_sample(weights, num_samples, replacement=True):
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if isinstance(weights, core.DenseTensor):
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weights = weights.numpy()
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if isinstance(weights, (list, tuple)):
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weights = np.array(weights)
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assert isinstance(weights, np.ndarray), (
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"weights should be paddle.Tensor, numpy.ndarray, list or tuple"
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)
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assert len(weights.shape) <= 2, "weights should be a 1-D or 2-D array"
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weights = weights.reshape((-1, weights.shape[-1]))
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assert np.all(weights >= 0.0), "weights should be positive value"
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assert not np.any(weights == np.inf), "weights should not be INF"
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assert not np.any(weights == np.nan), "weights should not be NaN"
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non_zeros = np.sum(weights > 0.0, axis=1)
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assert np.all(non_zeros > 0), "weights should have positive values"
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if not replacement:
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assert np.all(non_zeros >= num_samples), (
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"weights positive value number should not "
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"less than num_samples when replacement=False"
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)
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weights = weights / weights.sum(axis=1)
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rets = []
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for i in range(weights.shape[0]):
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ret = np.random.choice(
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weights.shape[1], num_samples, replacement, weights[i]
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)
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rets.append(ret)
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return np.array(rets)
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class WeightedRandomSampler(Sampler[int]):
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"""
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Random sample with given weights (probabilities), sample index will be in range
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[0, len(weights) - 1], if :attr:`replacement` is True, index can be sampled
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multiple times.
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Args:
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weights(numpy.ndarray|paddle.Tensor|list|tuple): sequence of weights,
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should be numpy array, paddle.Tensor, list or tuple
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num_samples(int): set sample number to draw from sampler.
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replacement(bool): Whether to draw sample with replacements, default True
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Returns:
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Sampler: a Sampler yield sample index randomly by given weights
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Examples:
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.. code-block:: pycon
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>>> import numpy as np
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>>> from paddle.io import WeightedRandomSampler
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>>> np.random.seed(2023)
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>>> sampler = WeightedRandomSampler(
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... weights=[0.1, 0.3, 0.5, 0.7, 0.2],
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... num_samples=5,
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... replacement=True,
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... )
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>>> for index in sampler:
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... print(index)
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2
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4
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3
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1
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1
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"""
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weights: npt.NDArray[Any] | Tensor | Sequence[float]
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num_samples: int
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replacement: bool
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def __init__(
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self,
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weights: npt.NDArray[Any] | Tensor | Sequence[float],
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num_samples: int,
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replacement: bool = True,
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) -> None:
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if not isinstance(num_samples, int) or num_samples <= 0:
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raise ValueError("num_samples should be a positive integer")
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if not isinstance(replacement, bool):
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raise ValueError("replacement should be a boolean value")
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self.weights = weights
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self.num_samples = num_samples
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self.replacement = replacement
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def __iter__(self) -> Iterator[int]:
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idxs = _weighted_sample(
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self.weights, self.num_samples, self.replacement
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)
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return iter(idxs.reshape(-1).tolist())
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def __len__(self) -> int:
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mul = np.prod(self.weights.shape) // self.weights.shape[-1]
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return self.num_samples * mul
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class SubsetRandomSampler(Sampler[int]):
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r"""
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Randomly sample elements from a given list of indices, without replacement.
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Args:
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indices (sequence): a sequence of indices
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Examples:
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.. code-block:: pycon
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>>> import paddle
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>>> from paddle.io import SubsetRandomSampler
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>>> paddle.seed(2023)
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>>> sampler = SubsetRandomSampler(indices=[1, 3, 5, 7, 9])
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>>> for index in sampler:
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... print(index)
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9
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3
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7
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5
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1
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"""
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indices: Sequence[int]
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def __init__(self, indices: Sequence[int]) -> None:
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if len(indices) == 0:
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raise ValueError(
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"The length of `indices` in SubsetRandomSampler should be greater than 0."
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)
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self.indices = indices
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def __iter__(self) -> Iterator[int]:
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for i in randperm(len(self.indices)):
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yield self.indices[i]
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def __len__(self) -> int:
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return len(self.indices)
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