283 lines
9.3 KiB
Python
283 lines
9.3 KiB
Python
# Copyright (c) 2021 PaddlePaddle Authors. All Rights Reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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from __future__ import annotations
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from collections.abc import Sequence
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from typing import TYPE_CHECKING
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import paddle
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from paddle.base.data_feeder import convert_dtype
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from paddle.distribution import distribution
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from paddle.utils.decorator_utils import param_one_alias
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if TYPE_CHECKING:
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from paddle import Tensor
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from paddle._typing.dtype_like import _DTypeLiteral
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class Poisson(distribution.Distribution):
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r"""
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The Poisson distribution with occurrence rate parameter: `rate`.
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In probability theory and statistics, the Poisson distribution is the most basic discrete probability
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distribution defined on the nonnegative integer set, which is used to describe the probability distribution of the number of random
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events occurring per unit time.
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The probability mass function (pmf) is
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.. math::
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pmf(x; \lambda) = \frac{e^{-\lambda} \cdot \lambda^x}{x!}
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In the above equation:
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* :math:`rate = \lambda`: is the mean occurrence rate.
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Args:
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rate(int|float|Tensor): The mean occurrence rate of Poisson distribution which should be greater than 0, meaning the expected occurrence
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times of an event in a fixed time interval. If the input data type is int or float, the data type of `rate` will be converted to a
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1-D Tensor with paddle global default dtype.
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Examples:
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.. code-block:: pycon
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>>> import paddle
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>>> from paddle.distribution import Poisson
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>>> paddle.set_device('cpu')
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>>> paddle.seed(100)
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>>> rv = Poisson(paddle.to_tensor(30.0))
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>>> print(rv.sample([3]))
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Tensor(shape=[3], dtype=float32, place=Place(cpu), stop_gradient=True,
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[32., 27., 25.])
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>>> print(rv.mean)
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Tensor(shape=[], dtype=float32, place=Place(cpu), stop_gradient=True,
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30.)
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>>> print(rv.entropy())
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Tensor(shape=[], dtype=float32, place=Place(cpu), stop_gradient=True,
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3.11671519)
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>>> rv1 = Poisson(paddle.to_tensor([[30.0, 40.0], [8.0, 5.0]]))
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>>> rv2 = Poisson(paddle.to_tensor([[1000.0, 40.0], [7.0, 10.0]]))
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>>> print(rv1.kl_divergence(rv2))
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Tensor(shape=[2, 2], dtype=float32, place=Place(cpu), stop_gradient=True,
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[[864.80499268, 0. ],
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[0.06825146 , 1.53426409 ]])
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"""
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rate: Tensor
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dtype: _DTypeLiteral
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def __init__(self, rate: float | Tensor) -> None:
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self.dtype = paddle.get_default_dtype()
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self.rate = self._to_tensor(rate)
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batch_shape = self.rate.shape
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super().__init__(batch_shape)
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def _to_tensor(self, rate: float | Tensor) -> Tensor:
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"""Convert the input parameters into tensors.
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Returns:
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Tensor: converted rate.
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"""
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# convert type
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if isinstance(rate, (float, int)):
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rate = paddle.to_tensor([rate], dtype=self.dtype)
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else:
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self.dtype = convert_dtype(rate.dtype)
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return rate
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@property
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def mean(self) -> Tensor:
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"""Mean of poisson distribution.
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Returns:
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Tensor: mean value.
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"""
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return self.rate
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@property
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def variance(self) -> Tensor:
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"""Variance of poisson distribution.
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Returns:
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Tensor: variance value.
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"""
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return self.rate
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@param_one_alias(["shape", "sample_shape"])
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def sample(self, shape: Sequence[int] = []) -> Tensor:
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"""Generate poisson samples of the specified shape. The final shape would be ``shape+batch_shape`` .
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Args:
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shape (Sequence[int], optional): Prepended shape of the generated samples.
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Returns:
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Tensor: Sampled data with shape `sample_shape` + `batch_shape`.
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"""
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if not isinstance(shape, Sequence):
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raise TypeError('sample shape must be Sequence object.')
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shape = tuple(shape)
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batch_shape = tuple(self.batch_shape)
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output_shape = tuple(shape + batch_shape)
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output_rate = paddle.broadcast_to(self.rate, shape=output_shape)
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with paddle.no_grad():
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return paddle.poisson(output_rate)
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def entropy(self) -> Tensor:
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r"""Shannon entropy in nats.
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The entropy is
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.. math::
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\mathcal{H}(X) = - \sum_{x \in \Omega} p(x) \log{p(x)}
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In the above equation:
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* :math:`\Omega`: is the support of the distribution.
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Returns:
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Tensor: Shannon entropy of poisson distribution. The data type is the same as `rate`.
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"""
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values = self._enumerate_bounded_support(self.rate).reshape(
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(-1,) + (1,) * len(self.batch_shape)
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)
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log_prob = self.log_prob(values)
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proposed = -(paddle.exp(log_prob) * log_prob).sum(0)
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mask = paddle.cast(
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paddle.not_equal(
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self.rate, paddle.to_tensor(0.0, dtype=self.dtype)
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),
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dtype=self.dtype,
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)
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return paddle.multiply(proposed, mask)
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def _enumerate_bounded_support(self, rate: float | Tensor) -> Tensor:
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"""Generate a bounded approximation of the support. Approximately view Poisson r.v. as a
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Normal r.v. with mu = rate and sigma = sqrt(rate). Then by 30-sigma rule, generate a bounded
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approximation of the support.
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Args:
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rate (float): rate of one poisson r.v.
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Returns:
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Tensor: the bounded approximation of the support
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"""
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if paddle.framework.in_dynamic_mode():
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s_max = (
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paddle.sqrt(paddle.max(rate))
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if paddle.greater_equal(
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paddle.max(rate), paddle.to_tensor(1.0, dtype=self.dtype)
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)
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else paddle.ones_like(rate, dtype=self.dtype)
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)
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upper = paddle.max(paddle.cast(rate + 30 * s_max, dtype="int32"))
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values = paddle.arange(0, upper, dtype=self.dtype)
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return values
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else:
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def true_func():
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return paddle.sqrt(paddle.max(rate))
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def false_func():
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return paddle.to_tensor(1.0, dtype=self.dtype)
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s_max = paddle.static.nn.cond(
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paddle.greater_equal(
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paddle.max(rate), paddle.to_tensor(1.0, dtype=self.dtype)
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),
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true_func,
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false_func,
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)
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upper = paddle.max(paddle.cast(rate + 30 * s_max, dtype="int32"))
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values = paddle.arange(0, upper, dtype=self.dtype)
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return values
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def log_prob(self, value: Tensor) -> Tensor:
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"""Log probability density/mass function.
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Args:
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value (Tensor): The input tensor.
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Returns:
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Tensor: log probability. The data type is the same as `rate`.
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"""
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value = paddle.cast(value, dtype=self.dtype)
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eps = paddle.finfo(self.rate.dtype).eps
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return paddle.nan_to_num(
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(
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-self.rate
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+ value * paddle.log(self.rate)
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- paddle.lgamma(value + 1)
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),
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neginf=-eps,
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)
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def prob(self, value: Tensor) -> Tensor:
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"""Probability density/mass function.
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Args:
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value (Tensor): The input tensor.
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Returns:
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Tensor: probability. The data type is the same as `rate`.
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"""
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return paddle.exp(self.log_prob(value))
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def kl_divergence(self, other: Poisson) -> Tensor:
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r"""The KL-divergence between two poisson distributions with the same `batch_shape`.
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The probability density function (pdf) is
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.. math::
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KL\_divergence\lambda_1, \lambda_2) = \sum_x p_1(x) \log{\frac{p_1(x)}{p_2(x)}}
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.. math::
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p_1(x) = \frac{e^{-\lambda_1} \cdot \lambda_1^x}{x!}
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.. math::
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p_2(x) = \frac{e^{-\lambda_2} \cdot \lambda_2^x}{x!}
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Args:
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other (Poisson): instance of ``Poisson``.
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Returns:
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Tensor, kl-divergence between two poisson distributions. The data type is the same as `rate`.
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"""
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if self.batch_shape != other.batch_shape:
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raise ValueError(
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"KL divergence of two poisson distributions should share the same `batch_shape`."
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)
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rate_max = paddle.max(paddle.maximum(self.rate, other.rate))
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support_max = self._enumerate_bounded_support(rate_max)
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a_max = paddle.max(support_max)
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common_support = paddle.arange(0, a_max, dtype=self.dtype).reshape(
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(-1,) + (1,) * len(self.batch_shape)
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)
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log_prob_1 = self.log_prob(common_support)
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log_prob_2 = other.log_prob(common_support)
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return (paddle.exp(log_prob_1) * (log_prob_1 - log_prob_2)).sum(0)
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