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99 lines
3.9 KiB
Python
99 lines
3.9 KiB
Python
# Copyright (c) 2021, NVIDIA CORPORATION. All rights reserved.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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import argparse
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import os
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import re
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from pathlib import Path
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import pandas as pd
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parser = argparse.ArgumentParser(description="Compare alignment segments generated with different window sizes")
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parser.add_argument(
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"--base_dir",
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default="output",
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type=str,
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required=True,
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help="Path to directory with 'logs' and 'segments' folders generated during the segmentation step",
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)
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if __name__ == "__main__":
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args = parser.parse_args()
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segments_dir = os.path.join(args.base_dir, "segments")
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if not os.path.exists(segments_dir):
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raise ValueError(f"'segments' directory was not found at {args.base_dir}.")
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all_files = Path(segments_dir).glob("*_segments.txt")
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all_alignment_files = {}
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for file in all_files:
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base_name = re.sub(r"^\d+_", "", file.name)
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if base_name not in all_alignment_files:
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all_alignment_files[base_name] = []
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all_alignment_files[base_name].append(file)
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verified_dir = os.path.join(args.base_dir, "verified_segments")
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os.makedirs(verified_dir, exist_ok=True)
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def readlines(file):
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with open(file, "r") as f:
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lines = f.readlines()
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return lines
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stats = {}
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for part, alignment_files in all_alignment_files.items():
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stats[part] = {}
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num_alignment_files = len(alignment_files)
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all_alignments = []
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for alignment in alignment_files:
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all_alignments.append(readlines(alignment))
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with open(os.path.join(verified_dir, part), "w") as f:
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num_segments = len(all_alignments[0])
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stats[part]["Original number of segments"] = num_segments
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stats[part]["Verified segments"] = 0
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stats[part]["Original Duration, min"] = 0
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stats[part]["Verified Duration, min"] = 0
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for i in range(num_segments):
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line = all_alignments[0][i]
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valid_line = True
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if i == 0:
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duration = 0
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else:
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info = line.split("|")[0].split()
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duration = (float(info[1]) - float(info[0])) / 60
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stats[part]["Original Duration, min"] += duration
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for alignment in all_alignments:
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if line != alignment[i]:
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valid_line = False
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if valid_line:
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f.write(line)
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stats[part]["Verified segments"] += 1
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stats[part]["Verified Duration, min"] += duration
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stats = pd.DataFrame.from_dict(stats, orient="index").reset_index()
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stats["Number dropped"] = stats["Original number of segments"] - stats["Verified segments"]
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stats["Duration of dropped, min"] = round(stats["Original Duration, min"] - stats["Verified Duration, min"])
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stats["% dropped, min"] = round(stats["Duration of dropped, min"] / stats["Original number of segments"] * 100)
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stats["Misalignment present"] = stats["Number dropped"] > 0
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stats["Original Duration, min"] = round(stats["Original Duration, min"])
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stats["Verified Duration, min"] = round(stats["Verified Duration, min"])
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stats.loc["Total"] = stats.sum()
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stats_file = os.path.join(args.base_dir, "alignment_summary.csv")
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stats.to_csv(stats_file, index=False)
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print(stats)
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print(f"Alignment summary saved to {stats_file}")
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