chore: import upstream snapshot with attribution
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#ifndef DOCTEST_MPI_H
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#define DOCTEST_MPI_H
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#ifdef DOCTEST_CONFIG_IMPLEMENT
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#include "doctest/extensions/mpi_sub_comm.h"
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#include "mpi_reporter.h"
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#include <unordered_map>
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namespace doctest {
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// Each time a MPI_TEST_CASE is executed on N procs,
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// we need a sub-communicator of N procs to execute it.
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// It is then registered here and can be re-used
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// by other tests that requires a sub-comm of the same size
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std::unordered_map<int,mpi_sub_comm> sub_comms_by_size;
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// Record if at least one MPI_TEST_CASE was registered "skipped"
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// because there is not enought procs to execute it
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int nb_test_cases_skipped_insufficient_procs = 0;
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std::string thread_level_to_string(int thread_lvl);
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int mpi_init_thread(int argc, char *argv[], int required_thread_support);
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void mpi_finalize();
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// Can be safely called before MPI_Init()
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// This is needed for MPI_TEST_CASE because we use doctest::skip()
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// to prevent execution of tests where there is not enough procs,
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// but doctest::skip() is called during test registration, that is, before main(), and hence before MPI_Init()
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int mpi_comm_world_size() {
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#if defined(OPEN_MPI)
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const char* size_str = std::getenv("OMPI_COMM_WORLD_SIZE");
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#elif defined(I_MPI_VERSION) || defined(MPI_VERSION) // Intel MPI + MPICH (at least)
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const char* size_str = std::getenv("PMI_SIZE"); // see https://community.intel.com/t5/Intel-oneAPI-HPC-Toolkit/Environment-variables-defined-by-intel-mpirun/td-p/1096703
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#else
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#error "Unknown MPI implementation: please submit an issue or a PR to doctest. Meanwhile, you can look at the output of e.g. `mpirun -np 3 env` to search for an environnement variable that contains the size of MPI_COMM_WORLD and extend this code accordingly"
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#endif
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if (size_str==nullptr) return 1; // not launched with mpirun/mpiexec, so assume only one process
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return std::stoi(size_str);
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}
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// Record size of MPI_COMM_WORLD with mpi_comm_world_size()
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int world_size_before_init = mpi_comm_world_size();
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std::string thread_level_to_string(int thread_lvl) {
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switch (thread_lvl) {
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case MPI_THREAD_SINGLE: return "MPI_THREAD_SINGLE";
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case MPI_THREAD_FUNNELED: return "MPI_THREAD_FUNNELED";
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case MPI_THREAD_SERIALIZED: return "MPI_THREAD_SERIALIZED";
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case MPI_THREAD_MULTIPLE: return "MPI_THREAD_MULTIPLE";
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default: return "Invalid MPI thread level";
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}
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}
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int mpi_init_thread(int argc, char *argv[], int required_thread_support) {
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int provided_thread_support;
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MPI_Init_thread(&argc, &argv, required_thread_support, &provided_thread_support);
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int world_size;
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MPI_Comm_size(MPI_COMM_WORLD,&world_size);
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if (world_size_before_init != world_size) {
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DOCTEST_INTERNAL_ERROR(
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"doctest found "+std::to_string(world_size_before_init)+" MPI processes before `MPI_Init_thread`,"
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" but MPI_COMM_WORLD is actually of size "+std::to_string(world_size)+".\n"
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"This is most likely due to your MPI implementation not being well supported by doctest. Please report this issue on GitHub"
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);
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}
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if (provided_thread_support!=required_thread_support) {
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std::cout <<
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"WARNING: " + thread_level_to_string(required_thread_support) + " was asked, "
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+ "but only " + thread_level_to_string(provided_thread_support) + " is provided by the MPI library\n";
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}
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return provided_thread_support;
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}
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void mpi_finalize() {
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// We need to destroy all created sub-communicators before calling MPI_Finalize()
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doctest::sub_comms_by_size.clear();
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MPI_Finalize();
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}
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} // doctest
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#else // DOCTEST_CONFIG_IMPLEMENT
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#include "doctest/extensions/mpi_sub_comm.h"
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#include <unordered_map>
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#include <exception>
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namespace doctest {
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extern std::unordered_map<int,mpi_sub_comm> sub_comms_by_size;
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extern int nb_test_cases_skipped_insufficient_procs;
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extern int world_size_before_init;
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int mpi_comm_world_size();
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int mpi_init_thread(int argc, char *argv[], int required_thread_support);
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void mpi_finalize();
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template<int nb_procs, class F>
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void execute_mpi_test_case(F func) {
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auto it = sub_comms_by_size.find(nb_procs);
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if (it==end(sub_comms_by_size)) {
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bool was_emplaced = false;
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std::tie(it,was_emplaced) = sub_comms_by_size.emplace(std::make_pair(nb_procs,mpi_sub_comm(nb_procs)));
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assert(was_emplaced);
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}
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const mpi_sub_comm& sub = it->second;
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if (sub.comm != MPI_COMM_NULL) {
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func(sub.rank,nb_procs,sub.comm,std::integral_constant<int,nb_procs>{});
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};
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}
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inline bool
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insufficient_procs(int test_nb_procs) {
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static const int world_size = mpi_comm_world_size();
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bool insufficient = test_nb_procs>world_size;
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if (insufficient) {
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++nb_test_cases_skipped_insufficient_procs;
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}
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return insufficient;
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}
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} // doctest
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#define DOCTEST_MPI_GEN_ASSERTION(rank_to_test, assertion, ...) \
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static_assert(rank_to_test<test_nb_procs_as_int_constant.value,"Trying to assert on a rank greater than the number of procs of the test!"); \
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if(rank_to_test == test_rank) assertion(__VA_ARGS__)
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#define DOCTEST_MPI_WARN(rank_to_test, ...) DOCTEST_MPI_GEN_ASSERTION(rank_to_test,DOCTEST_WARN,__VA_ARGS__)
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#define DOCTEST_MPI_CHECK(rank_to_test, ...) DOCTEST_MPI_GEN_ASSERTION(rank_to_test,DOCTEST_CHECK,__VA_ARGS__)
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#define DOCTEST_MPI_REQUIRE(rank_to_test, ...) DOCTEST_MPI_GEN_ASSERTION(rank_to_test,DOCTEST_REQUIRE,__VA_ARGS__)
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#define DOCTEST_MPI_WARN_FALSE(rank_to_test, ...) DOCTEST_MPI_GEN_ASSERTION(rank_to_test,DOCTEST_WARN_FALSE,__VA_ARGS__)
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#define DOCTEST_MPI_CHECK_FALSE(rank_to_test, ...) DOCTEST_MPI_GEN_ASSERTION(rank_to_test,DOCTEST_CHECK_FALSE,__VA_ARGS__)
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#define DOCTEST_MPI_REQUIRE_FALSE(rank_to_test, ...) DOCTEST_MPI_GEN_ASSERTION(rank_to_test,DOCTEST_REQUIRE_FALSE,__VA_ARGS__)
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#define DOCTEST_CREATE_MPI_TEST_CASE(name,nb_procs,func) \
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static void func(DOCTEST_UNUSED int test_rank, DOCTEST_UNUSED int test_nb_procs, DOCTEST_UNUSED MPI_Comm test_comm, DOCTEST_UNUSED std::integral_constant<int,nb_procs>); \
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TEST_CASE(name * doctest::description("MPI_TEST_CASE") * doctest::skip(doctest::insufficient_procs(nb_procs))) { \
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doctest::execute_mpi_test_case<nb_procs>(func); \
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} \
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static void func(DOCTEST_UNUSED int test_rank, DOCTEST_UNUSED int test_nb_procs, DOCTEST_UNUSED MPI_Comm test_comm, DOCTEST_UNUSED std::integral_constant<int,nb_procs> test_nb_procs_as_int_constant)
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// DOC: test_rank, test_nb_procs, and test_comm are available UNDER THESE SPECIFIC NAMES in the body of the unit test
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// DOC: test_nb_procs_as_int_constant is equal to test_nb_procs, but as a compile time value
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// (used in CHECK-like macros to assert the checked rank exists)
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#define DOCTEST_MPI_TEST_CASE(name,nb_procs) \
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DOCTEST_CREATE_MPI_TEST_CASE(name,nb_procs,DOCTEST_ANONYMOUS(DOCTEST_MPI_FUNC))
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// == SHORT VERSIONS OF THE MACROS
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#if !defined(DOCTEST_CONFIG_NO_SHORT_MACRO_NAMES)
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#define MPI_WARN DOCTEST_MPI_WARN
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#define MPI_CHECK DOCTEST_MPI_CHECK
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#define MPI_REQUIRE DOCTEST_MPI_REQUIRE
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#define MPI_WARN_FALSE DOCTEST_MPI_WARN_FALSE
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#define MPI_CHECK_FALSE DOCTEST_MPI_CHECK_FALSE
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#define MPI_REQUIRE_FALSE DOCTEST_MPI_REQUIRE_FALSE
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#define MPI_TEST_CASE DOCTEST_MPI_TEST_CASE
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#endif // DOCTEST_CONFIG_NO_SHORT_MACRO_NAMES
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#endif // DOCTEST_CONFIG_IMPLEMENT
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#endif // DOCTEST_MPI_H
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@@ -0,0 +1,37 @@
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//
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// doctest_util.h - an accompanying extensions header to the main doctest.h header
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//
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// Copyright (c) 2016-2023 Viktor Kirilov
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//
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// Distributed under the MIT Software License
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// See accompanying file LICENSE.txt or copy at
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// https://opensource.org/licenses/MIT
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//
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// The documentation can be found at the library's page:
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// https://github.com/doctest/doctest/blob/master/doc/markdown/readme.md
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//
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#ifndef DOCTEST_UTIL_H
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#define DOCTEST_UTIL_H
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#ifndef DOCTEST_LIBRARY_INCLUDED
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#include "../doctest.h"
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#endif
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#include <memory>
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#include <vector>
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#include <string>
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namespace doctest {
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inline void applyCommandLine(doctest::Context& ctx, const std::vector<std::string>& args) {
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auto doctest_args = std::make_unique<const char*[]>(args.size());
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for (size_t i = 0; i < args.size(); ++i) {
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doctest_args[i] = args[i].c_str();
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}
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ctx.applyCommandLine(args.size(), doctest_args.get());
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}
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} // namespace doctest
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#endif // DOCTEST_UTIL_H
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@@ -0,0 +1,271 @@
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#ifndef DOCTEST_MPI_REPORTER_H
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#define DOCTEST_MPI_REPORTER_H
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// #include <doctest/doctest.h>
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#include <fstream>
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#include <string>
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#include "mpi.h"
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#include <vector>
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#include <mutex>
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namespace doctest {
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extern int nb_test_cases_skipped_insufficient_procs;
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int mpi_comm_world_size();
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namespace {
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// https://stackoverflow.com/a/11826666/1583122
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struct NullBuffer : std::streambuf {
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int overflow(int c) { return c; }
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};
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class NullStream : public std::ostream {
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public:
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NullStream()
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: std::ostream(&nullBuff)
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{}
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private:
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NullBuffer nullBuff = {};
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};
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static NullStream nullStream;
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/* \brief Extends the ConsoleReporter of doctest
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* Each process writes its results to its own file
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* Intended to be used when a test assertion fails and the user wants to know exactly what happens on which process
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*/
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struct MpiFileReporter : public ConsoleReporter {
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std::ofstream logfile_stream = {};
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MpiFileReporter(const ContextOptions& co)
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: ConsoleReporter(co,logfile_stream)
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{
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int rank = 0;
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MPI_Comm_rank(MPI_COMM_WORLD, &rank);
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std::string logfile_name = "doctest_" + std::to_string(rank) + ".log";
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logfile_stream = std::ofstream(logfile_name.c_str(), std::fstream::out);
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}
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};
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/* \brief Extends the ConsoleReporter of doctest
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* Allows to manage the execution of tests in a parallel framework
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* All results are collected on rank 0
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*/
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struct MpiConsoleReporter : public ConsoleReporter {
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private:
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static std::ostream& replace_by_null_if_not_rank_0(std::ostream* os) {
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int rank = 0;
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MPI_Comm_rank(MPI_COMM_WORLD, &rank);
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if (rank==0) {
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return *os;
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} else {
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return nullStream;
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}
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}
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std::vector<std::pair<std::string, int>> m_failure_str_queue = {};
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public:
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MpiConsoleReporter(const ContextOptions& co)
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: ConsoleReporter(co,replace_by_null_if_not_rank_0(co.cout))
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{}
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std::string file_line_to_string(const char* file, int line,
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const char* tail = ""){
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std::stringstream ss;
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ss << skipPathFromFilename(file)
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<< (opt.gnu_file_line ? ":" : "(")
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<< (opt.no_line_numbers ? 0 : line) // 0 or the real num depending on the option
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<< (opt.gnu_file_line ? ":" : "):") << tail;
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return ss.str();
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}
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void test_run_end(const TestRunStats& p) override {
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ConsoleReporter::test_run_end(p);
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const bool anythingFailed = p.numTestCasesFailed > 0 || p.numAssertsFailed > 0;
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// -----------------------------------------------------
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// > Gather information in rank 0
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int n_rank, rank;
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MPI_Comm_rank(MPI_COMM_WORLD, &rank);
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MPI_Comm_size(MPI_COMM_WORLD, &n_rank);
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int g_numAsserts = 0;
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int g_numAssertsFailed = 0;
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int g_numTestCasesFailed = 0;
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MPI_Reduce(&p.numAsserts , &g_numAsserts , 1, MPI_INT, MPI_SUM, 0, MPI_COMM_WORLD);
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MPI_Reduce(&p.numAssertsFailed , &g_numAssertsFailed , 1, MPI_INT, MPI_SUM, 0, MPI_COMM_WORLD);
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MPI_Reduce(&p.numTestCasesFailed, &g_numTestCasesFailed, 1, MPI_INT, MPI_SUM, 0, MPI_COMM_WORLD);
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std::vector<int> numAssertsFailedByRank;
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if(rank == 0){
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numAssertsFailedByRank.resize(static_cast<std::size_t>(n_rank));
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}
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MPI_Gather(&p.numAssertsFailed, 1, MPI_INT, numAssertsFailedByRank.data(), 1, MPI_INT, 0, MPI_COMM_WORLD);
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if(rank == 0) {
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separator_to_stream();
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s << Color::Cyan << "[doctest] " << Color::None << "assertions on all processes: " << std::setw(6)
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<< g_numAsserts << " | "
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<< ((g_numAsserts == 0 || anythingFailed) ? Color::None : Color::Green)
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<< std::setw(6) << (g_numAsserts - g_numAssertsFailed) << " passed" << Color::None
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<< " | " << (g_numAssertsFailed > 0 ? Color::Red : Color::None) << std::setw(6)
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<< g_numAssertsFailed << " failed" << Color::None << " |\n";
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if (nb_test_cases_skipped_insufficient_procs>0) {
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s << Color::Cyan << "[doctest] " << Color::Yellow << "WARNING: Skipped ";
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if (nb_test_cases_skipped_insufficient_procs>1) {
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s << nb_test_cases_skipped_insufficient_procs << " tests requiring more than ";
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} else {
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s << nb_test_cases_skipped_insufficient_procs << " test requiring more than ";
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}
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if (mpi_comm_world_size()>1) {
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s << mpi_comm_world_size() << " MPI processes to run\n";
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} else {
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s << mpi_comm_world_size() << " MPI process to run\n";
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}
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}
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separator_to_stream();
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if(g_numAssertsFailed > 0){
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s << Color::Cyan << "[doctest] " << Color::None << "fail on rank:" << std::setw(6) << "\n";
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for(std::size_t i = 0; i < numAssertsFailedByRank.size(); ++i){
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if( numAssertsFailedByRank[i] > 0 ){
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s << std::setw(16) << " -> On rank [" << i << "] with " << numAssertsFailedByRank[i] << " test failed" << std::endl;
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}
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}
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}
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s << Color::Cyan << "[doctest] " << Color::None
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<< "Status: " << (g_numTestCasesFailed > 0 ? Color::Red : Color::Green)
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<< ((g_numTestCasesFailed > 0) ? "FAILURE!" : "SUCCESS!") << Color::None << std::endl;
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}
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}
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void test_case_end(const CurrentTestCaseStats& st) override {
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if (is_mpi_test_case()) {
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// function called by every rank at the end of a test
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// if failed assertions happened, they have been sent to rank 0
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// here rank zero gathers them and prints them all
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int rank;
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MPI_Comm_rank(MPI_COMM_WORLD, &rank);
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||||
std::vector<MPI_Request> requests;
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||||
requests.reserve(m_failure_str_queue.size()); // avoid realloc & copy of MPI_Request
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for (const std::pair<std::string, int> &failure : m_failure_str_queue)
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||||
{
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||||
const std::string & failure_str = failure.first;
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const int failure_line = failure.second;
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int failure_msg_size = static_cast<int>(failure_str.size());
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requests.push_back(MPI_REQUEST_NULL);
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MPI_Isend(failure_str.c_str(), failure_msg_size, MPI_BYTE,
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0, failure_line, MPI_COMM_WORLD, &requests.back()); // Tag = file line
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||||
}
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||||
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||||
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||||
// Compute the number of assert with fail among all procs
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||||
const int nb_fail_asserts = static_cast<int>(m_failure_str_queue.size());
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||||
int nb_fail_asserts_glob = 0;
|
||||
MPI_Reduce(&nb_fail_asserts, &nb_fail_asserts_glob, 1, MPI_INT, MPI_SUM, 0, MPI_COMM_WORLD);
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||||
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||||
if(rank == 0) {
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||||
MPI_Status status;
|
||||
MPI_Status status_recv;
|
||||
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||||
using id_string = std::pair<int,std::string>;
|
||||
std::vector<id_string> msgs(static_cast<std::size_t>(nb_fail_asserts_glob));
|
||||
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||||
for (std::size_t i=0; i<static_cast<std::size_t>(nb_fail_asserts_glob); ++i) {
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||||
MPI_Probe(MPI_ANY_SOURCE, MPI_ANY_TAG, MPI_COMM_WORLD, &status);
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||||
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||||
int count;
|
||||
MPI_Get_count(&status, MPI_BYTE, &count);
|
||||
|
||||
std::string recv_msg(static_cast<std::size_t>(count),'\0');
|
||||
void* recv_msg_data = const_cast<char*>(recv_msg.data()); // const_cast needed. Non-const .data() exists in C++11 though...
|
||||
MPI_Recv(recv_msg_data, count, MPI_BYTE, status.MPI_SOURCE,
|
||||
status.MPI_TAG, MPI_COMM_WORLD, &status_recv);
|
||||
|
||||
msgs[i] = {status.MPI_SOURCE,recv_msg};
|
||||
}
|
||||
|
||||
std::sort(begin(msgs),end(msgs),[](const id_string& x, const id_string& y){ return x.first < y.first; });
|
||||
|
||||
// print
|
||||
if (nb_fail_asserts_glob>0) {
|
||||
separator_to_stream();
|
||||
file_line_to_stream(tc->m_file.c_str(), static_cast<int>(tc->m_line), "\n");
|
||||
if(tc->m_test_suite && tc->m_test_suite[0] != '\0')
|
||||
s << Color::Yellow << "TEST SUITE: " << Color::None << tc->m_test_suite << "\n";
|
||||
if(strncmp(tc->m_name, " Scenario:", 11) != 0)
|
||||
s << Color::Yellow << "TEST CASE: ";
|
||||
s << Color::None << tc->m_name << "\n\n";
|
||||
for(const auto& msg : msgs) {
|
||||
s << msg.second;
|
||||
}
|
||||
s << "\n";
|
||||
}
|
||||
}
|
||||
|
||||
MPI_Waitall(static_cast<int>(requests.size()), requests.data(), MPI_STATUSES_IGNORE);
|
||||
m_failure_str_queue.clear();
|
||||
}
|
||||
|
||||
ConsoleReporter::test_case_end(st);
|
||||
}
|
||||
|
||||
bool is_mpi_test_case() const {
|
||||
return tc->m_description != nullptr
|
||||
&& std::string(tc->m_description) == std::string("MPI_TEST_CASE");
|
||||
}
|
||||
|
||||
void log_assert(const AssertData& rb) override {
|
||||
if (!is_mpi_test_case()) {
|
||||
ConsoleReporter::log_assert(rb);
|
||||
} else {
|
||||
int rank;
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &rank);
|
||||
|
||||
|
||||
if(!rb.m_failed && !opt.success)
|
||||
return;
|
||||
|
||||
std::lock_guard<std::mutex> lock(mutex);
|
||||
|
||||
std::stringstream failure_msg;
|
||||
failure_msg << Color::Red << "On rank [" << rank << "] : " << Color::None;
|
||||
failure_msg << file_line_to_string(rb.m_file, rb.m_line, " ");
|
||||
|
||||
if((rb.m_at & (assertType::is_throws_as | assertType::is_throws_with)) ==0){
|
||||
failure_msg << Color::Cyan
|
||||
<< assertString(rb.m_at)
|
||||
<< "( " << rb.m_expr << " ) "
|
||||
<< Color::None
|
||||
|
||||
<< (!rb.m_failed ? "is correct!\n" : "is NOT correct!\n")
|
||||
<< " values: "
|
||||
<< assertString(rb.m_at)
|
||||
<< "( " << rb.m_decomp.c_str() << " )\n";
|
||||
}
|
||||
|
||||
m_failure_str_queue.push_back({failure_msg.str(), rb.m_line});
|
||||
}
|
||||
}
|
||||
}; // MpiConsoleReporter
|
||||
|
||||
// "1" is the priority - used for ordering when multiple reporters/listeners are used
|
||||
REGISTER_REPORTER("MpiConsoleReporter", 1, MpiConsoleReporter);
|
||||
REGISTER_REPORTER("MpiFileReporter", 1, MpiFileReporter);
|
||||
|
||||
} // anonymous
|
||||
} // doctest
|
||||
|
||||
#endif // DOCTEST_REPORTER_H
|
||||
@@ -0,0 +1,84 @@
|
||||
#ifndef DOCTEST_MPI_SUB_COMM_H
|
||||
#define DOCTEST_MPI_SUB_COMM_H
|
||||
|
||||
#include "mpi.h"
|
||||
#include "doctest/doctest.h"
|
||||
#include <cassert>
|
||||
#include <string>
|
||||
|
||||
namespace doctest {
|
||||
|
||||
inline
|
||||
int mpi_world_nb_procs() {
|
||||
int n;
|
||||
MPI_Comm_size(MPI_COMM_WORLD, &n);
|
||||
return n;
|
||||
}
|
||||
|
||||
struct mpi_sub_comm {
|
||||
int nb_procs;
|
||||
int rank;
|
||||
MPI_Comm comm;
|
||||
|
||||
mpi_sub_comm( mpi_sub_comm const& ) = delete;
|
||||
mpi_sub_comm& operator=( mpi_sub_comm const& ) = delete;
|
||||
|
||||
mpi_sub_comm(int nb_prcs) noexcept
|
||||
: nb_procs(nb_prcs)
|
||||
, rank(-1)
|
||||
, comm(MPI_COMM_NULL)
|
||||
{
|
||||
int comm_world_rank;
|
||||
MPI_Comm_rank(MPI_COMM_WORLD, &comm_world_rank);
|
||||
if (nb_procs>mpi_world_nb_procs()) {
|
||||
if (comm_world_rank==0) {
|
||||
MESSAGE(
|
||||
"Unable to run test: need ", std::to_string(nb_procs), " procs",
|
||||
" but program launched with only ", std::to_string(doctest::mpi_world_nb_procs()), "."
|
||||
);
|
||||
CHECK(nb_procs<=mpi_world_nb_procs());
|
||||
}
|
||||
} else {
|
||||
int color = MPI_UNDEFINED;
|
||||
if(comm_world_rank < nb_procs){
|
||||
color = 0;
|
||||
}
|
||||
MPI_Comm_split(MPI_COMM_WORLD, color, comm_world_rank, &comm);
|
||||
|
||||
if(comm != MPI_COMM_NULL){
|
||||
MPI_Comm_rank(comm, &rank);
|
||||
assert(rank==comm_world_rank);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
void destroy_comm() {
|
||||
if(comm != MPI_COMM_NULL){
|
||||
MPI_Comm_free(&comm);
|
||||
}
|
||||
}
|
||||
|
||||
mpi_sub_comm(mpi_sub_comm&& x)
|
||||
: nb_procs(x.nb_procs)
|
||||
, rank(x.rank)
|
||||
, comm(x.comm)
|
||||
{
|
||||
x.comm = MPI_COMM_NULL;
|
||||
}
|
||||
mpi_sub_comm& operator=(mpi_sub_comm&& x) {
|
||||
destroy_comm();
|
||||
nb_procs = x.nb_procs;
|
||||
rank = x.rank;
|
||||
comm = x.comm;
|
||||
x.comm = MPI_COMM_NULL;
|
||||
return *this;
|
||||
}
|
||||
|
||||
~mpi_sub_comm() {
|
||||
destroy_comm();
|
||||
}
|
||||
};
|
||||
|
||||
} // doctest
|
||||
|
||||
#endif // DOCTEST_SUB_COMM_H
|
||||
Reference in New Issue
Block a user