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560 lines
21 KiB
Python
560 lines
21 KiB
Python
import json
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import logging
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import re
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from contextlib import contextmanager
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from typing import Any, List, Optional
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from urllib.parse import parse_qsl, urlencode, urlsplit
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from pydantic import BaseModel
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# Try to import psycopg (psycopg3) first, then fall back to psycopg2
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try:
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from psycopg import sql
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from psycopg.types.json import Json
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from psycopg_pool import ConnectionPool
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PSYCOPG_VERSION = 3
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logger = logging.getLogger(__name__)
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logger.info("Using psycopg (psycopg3) with ConnectionPool for PostgreSQL connections")
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except ImportError:
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try:
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from psycopg2 import sql
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from psycopg2.extras import Json, execute_values
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from psycopg2.pool import ThreadedConnectionPool as ConnectionPool
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PSYCOPG_VERSION = 2
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logger = logging.getLogger(__name__)
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logger.info("Using psycopg2 with ThreadedConnectionPool for PostgreSQL connections")
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except ImportError:
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raise ImportError(
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"Neither 'psycopg' nor 'psycopg2' library is available. "
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"Please install one of them using 'pip install psycopg[pool]' or 'pip install psycopg2'"
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)
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from mem0.vector_stores.base import VectorStoreBase
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logger = logging.getLogger(__name__)
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OPERATOR_SQL_MAP = {
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"eq": ("payload->>%s = %s", False),
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"ne": ("payload->>%s != %s", False),
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"gt": ("(payload->>%s)::numeric > %s", True),
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"gte": ("(payload->>%s)::numeric >= %s", True),
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"lt": ("(payload->>%s)::numeric < %s", True),
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"lte": ("(payload->>%s)::numeric <= %s", True),
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"in": ("payload->>%s = ANY(%s)", False),
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"nin": ("NOT (payload->>%s = ANY(%s))", False),
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"contains": ("payload->>%s LIKE %s", False),
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"icontains": ("payload->>%s ILIKE %s", False),
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}
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def _build_filter_conditions(filters):
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"""Translate a processed filter dict into SQL WHERE fragments and parameter list."""
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conditions = []
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params = []
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if not filters:
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return conditions, params
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for key, value in filters.items():
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if key == "$or":
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or_groups = []
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for or_filter in value:
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sub_conds, sub_params = _build_filter_conditions(or_filter)
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if sub_conds:
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or_groups.append("(" + " AND ".join(sub_conds) + ")")
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params.extend(sub_params)
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if or_groups:
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conditions.append("(" + " OR ".join(or_groups) + ")")
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continue
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if key == "$not":
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not_groups = []
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for not_filter in value:
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sub_conds, sub_params = _build_filter_conditions(not_filter)
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if sub_conds:
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not_groups.append("(" + " AND ".join(sub_conds) + ")")
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params.extend(sub_params)
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if not_groups:
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conditions.append("NOT (" + " OR ".join(not_groups) + ")")
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continue
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if value == "*":
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conditions.append("payload ? %s")
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params.append(key)
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continue
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if isinstance(value, dict):
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for op, op_value in value.items():
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if op not in OPERATOR_SQL_MAP:
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raise ValueError(f"Unsupported filter operator: {op}")
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template, is_numeric = OPERATOR_SQL_MAP[op]
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if op in ("in", "nin"):
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str_list = [str(v) for v in op_value]
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conditions.append(template)
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params.extend([key, str_list])
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elif op in ("contains", "icontains"):
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escaped = str(op_value).replace("\\", "\\\\").replace("%", "\\%").replace("_", "\\_")
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conditions.append(template + " ESCAPE '\\'")
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params.extend([key, f"%{escaped}%"])
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else:
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conditions.append(template)
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if is_numeric:
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params.extend([key, float(op_value)])
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else:
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params.extend([key, str(op_value)])
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elif isinstance(value, list):
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conditions.append("payload->>%s = ANY(%s)")
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params.extend([key, [str(v) for v in value]])
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else:
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conditions.append("payload->>%s = %s")
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if isinstance(value, bool):
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params.extend([key, json.dumps(value)])
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else:
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params.extend([key, str(value)])
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return conditions, params
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def _with_sslmode(connection_string: str, sslmode: str) -> str:
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"""Add or replace sslmode in URI and keyword conninfo strings.
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Keyword conninfo values are assumed not to contain nested ``sslmode=``
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substrings, such as inside an ``options`` value.
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"""
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if "://" in connection_string:
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parsed = urlsplit(connection_string)
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query = [(key, value) for key, value in parse_qsl(parsed.query, keep_blank_values=True) if key != "sslmode"]
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query.append(("sslmode", sslmode))
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return parsed._replace(query=urlencode(query)).geturl()
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if re.search(r"(^|\s)sslmode=", connection_string):
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return re.sub(r"(^|\s)sslmode=\S+", lambda match: f"{match.group(1)}sslmode={sslmode}", connection_string)
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return f"{connection_string} sslmode={sslmode}"
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class OutputData(BaseModel):
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id: Optional[str]
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score: Optional[float]
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payload: Optional[dict]
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class PGVector(VectorStoreBase):
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def __init__(
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self,
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dbname,
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collection_name,
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embedding_model_dims,
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user,
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password,
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host,
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port,
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diskann,
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hnsw,
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minconn=1,
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maxconn=5,
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sslmode=None,
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connection_string=None,
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connection_pool=None,
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):
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"""
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Initialize the PGVector database.
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Args:
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dbname (str): Database name
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collection_name (str): Collection name
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embedding_model_dims (int): Dimension of the embedding vector
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user (str): Database user
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password (str): Database password
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host (str, optional): Database host
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port (int, optional): Database port
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diskann (bool, optional): Use DiskANN for faster search
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hnsw (bool, optional): Use HNSW for faster search
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minconn (int): Minimum number of connections to keep in the connection pool
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maxconn (int): Maximum number of connections allowed in the connection pool
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sslmode (str, optional): SSL mode for PostgreSQL connection (e.g., 'require', 'prefer', 'disable')
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connection_string (str, optional): PostgreSQL connection string (overrides individual connection parameters)
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connection_pool (Any, optional): psycopg2 connection pool object (overrides connection string and individual parameters)
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"""
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self.collection_name = collection_name
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self.use_diskann = diskann
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self.use_hnsw = hnsw
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self.embedding_model_dims = embedding_model_dims
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self.connection_pool = None
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self._collection_ensured = False
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# Connection setup with priority: connection_pool > connection_string > individual parameters
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if connection_pool is not None:
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# Use provided connection pool
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self.connection_pool = connection_pool
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elif connection_string:
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if sslmode:
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connection_string = _with_sslmode(connection_string, sslmode)
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else:
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connection_string = f"postgresql://{user}:{password}@{host}:{port}/{dbname}"
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if sslmode:
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connection_string = _with_sslmode(connection_string, sslmode)
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if self.connection_pool is None:
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if PSYCOPG_VERSION == 3:
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# open=False avoids blocking when DB DNS is not yet resolvable (e.g. Docker startup)
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self.connection_pool = ConnectionPool(
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conninfo=connection_string,
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min_size=minconn,
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max_size=maxconn,
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open=False,
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)
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self.connection_pool.open(wait=False)
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else:
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# psycopg2 ThreadedConnectionPool
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self.connection_pool = ConnectionPool(minconn=minconn, maxconn=maxconn, dsn=connection_string)
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def _ensure_collection(self):
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if self._collection_ensured:
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return
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collections = self.list_cols()
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if self.collection_name not in collections:
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self.create_col()
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self._collection_ensured = True
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@contextmanager
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def _get_cursor(self, commit: bool = False):
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"""
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Unified context manager to get a cursor from the appropriate pool.
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Auto-commits or rolls back based on exception, and returns the connection to the pool.
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"""
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if PSYCOPG_VERSION == 3:
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# psycopg3 auto-manages commit/rollback and pool return
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with self.connection_pool.connection() as conn:
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with conn.cursor() as cur:
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try:
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yield cur
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if commit:
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conn.commit()
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except Exception:
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conn.rollback()
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logger.error("Error in cursor context (psycopg3)", exc_info=True)
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raise
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else:
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# psycopg2 manual getconn/putconn
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conn = self.connection_pool.getconn()
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cur = conn.cursor()
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try:
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yield cur
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if commit:
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conn.commit()
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except Exception as exc:
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conn.rollback()
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logger.error(f"Error occurred: {exc}")
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raise exc
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finally:
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cur.close()
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self.connection_pool.putconn(conn)
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def _col(self) -> "sql.Identifier":
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"""Return a safely-quoted SQL identifier for the collection table."""
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return sql.Identifier(self.collection_name)
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def create_col(self) -> None:
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"""
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Create a new collection (table in PostgreSQL).
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Will also initialize vector search index if specified.
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"""
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with self._get_cursor(commit=True) as cur:
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cur.execute("CREATE EXTENSION IF NOT EXISTS vector")
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cur.execute(
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sql.SQL("""
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CREATE TABLE IF NOT EXISTS {} (
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id UUID PRIMARY KEY,
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vector vector({}),
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payload JSONB
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);
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""").format(self._col(), sql.Literal(self.embedding_model_dims))
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)
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if self.use_diskann and self.embedding_model_dims < 2000:
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cur.execute("SELECT * FROM pg_extension WHERE extname = 'vectorscale'")
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if cur.fetchone():
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# Create DiskANN index if extension is installed for faster search
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cur.execute(
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sql.SQL("""
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CREATE INDEX IF NOT EXISTS {} ON {}
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USING diskann (vector);
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""").format(
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sql.Identifier(f"{self.collection_name}_diskann_idx"),
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self._col(),
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)
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)
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elif self.use_hnsw:
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cur.execute(
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sql.SQL("""
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CREATE INDEX IF NOT EXISTS {} ON {}
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USING hnsw (vector vector_cosine_ops)
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""").format(
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sql.Identifier(f"{self.collection_name}_hnsw_idx"),
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self._col(),
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)
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)
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cur.execute(
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sql.SQL("""
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CREATE INDEX IF NOT EXISTS {} ON {}
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USING gin(to_tsvector('simple', payload->>'text_lemmatized'));
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""").format(
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sql.Identifier(f"{self.collection_name}_text_lemmatized_idx"),
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self._col(),
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)
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)
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def insert(self, vectors: list[list[float]], payloads=None, ids=None) -> None:
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self._ensure_collection()
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logger.info(f"Inserting {len(vectors)} vectors into collection {self.collection_name}")
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json_payloads = [json.dumps(payload) for payload in payloads]
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data = [(id, vector, payload) for id, vector, payload in zip(ids, vectors, json_payloads)]
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if PSYCOPG_VERSION == 3:
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with self._get_cursor(commit=True) as cur:
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cur.executemany(
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sql.SQL("INSERT INTO {} (id, vector, payload) VALUES (%s, %s, %s)").format(self._col()),
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data,
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)
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else:
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with self._get_cursor(commit=True) as cur:
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execute_values(
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cur,
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sql.SQL("INSERT INTO {} (id, vector, payload) VALUES %s").format(self._col()),
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data,
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)
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def search(
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self,
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query: str,
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vectors: list[float],
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top_k: Optional[int] = 5,
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filters: Optional[dict] = None,
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) -> List[OutputData]:
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"""
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Search for similar vectors.
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Args:
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query (str): Query.
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vectors (List[float]): Query vector.
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top_k (int, optional): Number of results to return. Defaults to 5.
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filters (Dict, optional): Filters to apply to the search. Defaults to None.
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Returns:
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list: Search results.
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"""
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self._ensure_collection()
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filter_conditions, filter_params = _build_filter_conditions(filters)
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filter_clause = sql.SQL("WHERE " + " AND ".join(filter_conditions)) if filter_conditions else sql.SQL("")
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with self._get_cursor() as cur:
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cur.execute(
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sql.SQL("""
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SELECT id, vector <=> %s::vector AS distance, payload
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FROM {}
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{}
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ORDER BY distance
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LIMIT %s
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""").format(self._col(), filter_clause),
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(vectors, *filter_params, top_k),
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)
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results = cur.fetchall()
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return [OutputData(id=str(r[0]), score=max(0.0, 1.0 - float(r[1])), payload=r[2]) for r in results]
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def keyword_search(self, query, top_k=5, filters=None):
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"""
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Search using PostgreSQL full-text search on lemmatized text.
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Args:
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query (str): The search query text.
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top_k (int, optional): Number of results to return. Defaults to 5.
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filters (dict, optional): Filters to apply to the search. Defaults to None.
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Returns:
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List[OutputData]: Search results ranked by text relevance.
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"""
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self._ensure_collection()
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filter_conditions, filter_params = _build_filter_conditions(filters)
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filter_clause = sql.SQL("AND " + " AND ".join(filter_conditions)) if filter_conditions else sql.SQL("")
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try:
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with self._get_cursor() as cur:
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cur.execute(
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sql.SQL("""
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SELECT id, ts_rank_cd(to_tsvector('simple', payload->>'text_lemmatized'), plainto_tsquery('simple', %s)) AS score, payload
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FROM {}
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WHERE to_tsvector('simple', payload->>'text_lemmatized') @@ plainto_tsquery('simple', %s)
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{}
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ORDER BY score DESC
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LIMIT %s
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""").format(self._col(), filter_clause),
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(query, query, *filter_params, top_k),
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)
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results = cur.fetchall()
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return [OutputData(id=str(r[0]), score=float(r[1]), payload=r[2]) for r in results]
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except Exception as e:
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logger.debug(f"Keyword search failed: {e}")
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return None
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def delete(self, vector_id: str) -> None:
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"""
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Delete a vector by ID.
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Args:
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vector_id (str): ID of the vector to delete.
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"""
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self._ensure_collection()
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with self._get_cursor(commit=True) as cur:
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cur.execute(sql.SQL("DELETE FROM {} WHERE id = %s").format(self._col()), (vector_id,))
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|
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def update(
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self,
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vector_id: str,
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vector: Optional[list[float]] = None,
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payload: Optional[dict] = None,
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) -> None:
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"""
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Update a vector and its payload.
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|
Args:
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vector_id (str): ID of the vector to update.
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vector (List[float], optional): Updated vector.
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payload (Dict, optional): Updated payload.
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"""
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self._ensure_collection()
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with self._get_cursor(commit=True) as cur:
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if vector is not None:
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cur.execute(
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sql.SQL("UPDATE {} SET vector = %s WHERE id = %s").format(self._col()),
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(vector, vector_id),
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)
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if payload is not None:
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# Handle JSON serialization based on psycopg version
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if PSYCOPG_VERSION == 3:
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# psycopg3 uses psycopg.types.json.Json
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cur.execute(
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sql.SQL("UPDATE {} SET payload = %s WHERE id = %s").format(self._col()),
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(Json(payload), vector_id),
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)
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else:
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# psycopg2 uses psycopg2.extras.Json
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cur.execute(
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sql.SQL("UPDATE {} SET payload = %s WHERE id = %s").format(self._col()),
|
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(Json(payload), vector_id),
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)
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|
|
|
|
def get(self, vector_id: str) -> OutputData:
|
|
"""
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|
Retrieve a vector by ID.
|
|
|
|
Args:
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vector_id (str): ID of the vector to retrieve.
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|
|
|
Returns:
|
|
OutputData: Retrieved vector.
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"""
|
|
self._ensure_collection()
|
|
with self._get_cursor() as cur:
|
|
cur.execute(
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sql.SQL("SELECT id, vector, payload FROM {} WHERE id = %s").format(self._col()),
|
|
(vector_id,),
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)
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|
result = cur.fetchone()
|
|
if not result:
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|
return None
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|
return OutputData(id=str(result[0]), score=None, payload=result[2])
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|
|
def list_cols(self) -> List[str]:
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"""
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|
List all collections.
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|
Returns:
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|
List[str]: List of collection names.
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|
"""
|
|
with self._get_cursor() as cur:
|
|
cur.execute("SELECT table_name FROM information_schema.tables WHERE table_schema = 'public'")
|
|
return [row[0] for row in cur.fetchall()]
|
|
|
|
def delete_col(self) -> None:
|
|
"""Delete a collection."""
|
|
with self._get_cursor(commit=True) as cur:
|
|
cur.execute(sql.SQL("DROP TABLE IF EXISTS {}").format(self._col()))
|
|
|
|
def col_info(self) -> dict[str, Any]:
|
|
"""
|
|
Get information about a collection.
|
|
|
|
Returns:
|
|
Dict[str, Any]: Collection information.
|
|
"""
|
|
self._ensure_collection()
|
|
with self._get_cursor() as cur:
|
|
cur.execute(
|
|
sql.SQL("""
|
|
SELECT
|
|
table_name,
|
|
(SELECT COUNT(*) FROM {}) as row_count,
|
|
(SELECT pg_size_pretty(pg_total_relation_size({}::regclass))) as total_size
|
|
FROM information_schema.tables
|
|
WHERE table_schema = 'public' AND table_name = %s
|
|
""").format(self._col(), sql.Literal(self.collection_name)),
|
|
(self.collection_name,),
|
|
)
|
|
result = cur.fetchone()
|
|
return {"name": result[0], "count": result[1], "size": result[2]}
|
|
|
|
def list(
|
|
self,
|
|
filters: Optional[dict] = None,
|
|
top_k: Optional[int] = 100
|
|
) -> List[OutputData]:
|
|
"""
|
|
List all vectors in a collection.
|
|
|
|
Args:
|
|
filters (Dict, optional): Filters to apply to the list.
|
|
top_k (int, optional): Number of vectors to return. Defaults to 100.
|
|
|
|
Returns:
|
|
List[OutputData]: List of vectors.
|
|
"""
|
|
self._ensure_collection()
|
|
filter_conditions, filter_params = _build_filter_conditions(filters)
|
|
filter_clause = sql.SQL("WHERE " + " AND ".join(filter_conditions)) if filter_conditions else sql.SQL("")
|
|
|
|
with self._get_cursor() as cur:
|
|
cur.execute(
|
|
sql.SQL("""
|
|
SELECT id, vector, payload
|
|
FROM {}
|
|
{}
|
|
LIMIT %s
|
|
""").format(self._col(), filter_clause),
|
|
(*filter_params, top_k),
|
|
)
|
|
results = cur.fetchall()
|
|
return [[OutputData(id=str(r[0]), score=None, payload=r[2]) for r in results]]
|
|
|
|
def __del__(self) -> None:
|
|
"""
|
|
Close the database connection pool when the object is deleted.
|
|
"""
|
|
try:
|
|
# Close pool appropriately
|
|
if PSYCOPG_VERSION == 3:
|
|
self.connection_pool.close()
|
|
else:
|
|
self.connection_pool.closeall()
|
|
except Exception:
|
|
pass
|
|
|
|
def reset(self) -> None:
|
|
"""Reset the index by deleting and recreating it."""
|
|
self._ensure_collection()
|
|
logger.warning(f"Resetting index {self.collection_name}...")
|
|
self.delete_col()
|
|
self.create_col()
|