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381 lines
13 KiB
Python
381 lines
13 KiB
Python
# Copyright (c) 2023 Predibase, Inc., 2019 Uber Technologies, Inc.
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#
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# Licensed under the Apache License, Version 2.0 (the "License");
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# you may not use this file except in compliance with the License.
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# You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing, software
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# distributed under the License is distributed on an "AS IS" BASIS,
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# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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# See the License for the specific language governing permissions and
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# limitations under the License.
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# ==============================================================================
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import json
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import logging
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import os.path
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import mlflow
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import pandas as pd
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import pytest
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from mlflow.tracking import MlflowClient
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from ludwig.backend import initialize_backend
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from ludwig.callbacks import Callback
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from ludwig.constants import ACCURACY, AUTO, BATCH_SIZE, EXECUTOR, MAX_CONCURRENT_TRIALS, TRAINER
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from ludwig.contribs.mlflow import MlflowCallback
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from ludwig.globals import HYPEROPT_STATISTICS_FILE_NAME, MODEL_FILE_NAME, MODEL_HYPERPARAMETERS_FILE_NAME
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from ludwig.hyperopt.results import HyperoptResults
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from ludwig.hyperopt.run import hyperopt
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from ludwig.hyperopt.utils import update_hyperopt_params_with_defaults
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from ludwig.schema.model_config import ModelConfig
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from ludwig.utils.automl.utils import get_model_type
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from tests.integration_tests.utils import category_feature, generate_data, text_feature
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try:
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import ray
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from ray.tune import Callback as TuneCallback
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from ray.tune.experiment.trial import Trial
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from ludwig.hyperopt.execution import get_build_hyperopt_executor
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except ImportError:
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ray = None
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Trial = None
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TuneCallback = object # needed to set up HyperoptTestCallback when not distributed
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pytestmark = pytest.mark.integration_tests_h
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logger = logging.getLogger(__name__)
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logger.setLevel(logging.INFO)
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logging.getLogger("ludwig").setLevel(logging.INFO)
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HYPEROPT_CONFIG = {
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"parameters": {
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"trainer.learning_rate": {
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"space": "loguniform",
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"lower": 0.001,
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"upper": 0.1,
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},
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"combiner.num_fc_layers": {"space": "randint", "lower": 0, "upper": 2},
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"utterance.encoder.norm": {"space": "grid_search", "values": ["layer", "batch"]},
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"utterance.encoder.fc_layers": {
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"space": "choice",
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"categories": [
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[{"output_size": 16}, {"output_size": 8}],
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[{"output_size": 16}],
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[{"output_size": 8}],
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],
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},
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},
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"goal": "minimize",
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}
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SCENARIOS = [
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{"executor": {"type": "ray"}, "search_alg": {"type": "variant_generator"}},
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{"executor": {"type": "ray", "num_samples": 2}, "search_alg": {"type": "variant_generator"}},
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{
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"executor": {
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"type": "ray",
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"num_samples": 3,
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"scheduler": {
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"type": "hb_bohb",
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"time_attr": "training_iteration",
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"reduction_factor": 4,
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"max_t": 2,
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},
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},
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"search_alg": {"type": "bohb"},
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},
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]
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def _get_config(search_alg: dict, executor: dict, epochs: int):
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input_features = [
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text_feature(name="utterance", encoder={"cell_type": "lstm", "reduce_output": "sum"}),
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category_feature(encoder={"vocab_size": 2}, reduce_input="sum"),
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]
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output_features = [category_feature(decoder={"vocab_size": 2}, reduce_input="sum", output_feature=True)]
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return {
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"input_features": input_features,
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"output_features": output_features,
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"combiner": {"type": "concat"},
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TRAINER: {"epochs": epochs, "learning_rate": 0.001, BATCH_SIZE: 128},
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"hyperopt": {
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**HYPEROPT_CONFIG,
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"executor": executor,
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"search_alg": search_alg,
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},
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}
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class HyperoptTestCallback(TuneCallback):
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def __init__(self, exp_name: str, model_type: str):
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self.exp_name = exp_name
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self.model_type = model_type
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self.trial_ids = set()
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self.trial_status = {}
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self.user_config = {}
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self.rendered_config = {}
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def on_trial_start(self, iteration: int, trials: list["Trial"], trial: "Trial", **info):
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super().on_trial_start(iteration, trials, trial, **info)
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self.trial_ids.add(trial.trial_id)
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def on_trial_complete(self, iteration: int, trials: list["Trial"], trial: "Trial", **info):
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super().on_trial_complete(iteration, trials, trial, **info)
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self.trial_status[trial.trial_id] = trial.status
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model_hyperparameters = os.path.join(
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trial.local_path, f"{self.exp_name}_{self.model_type}", MODEL_FILE_NAME, MODEL_HYPERPARAMETERS_FILE_NAME
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)
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if os.path.isfile(model_hyperparameters):
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try:
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with open(model_hyperparameters) as f:
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config = json.load(f)
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assert config, f"Trial {trial} rendered config was empty."
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self.rendered_config[trial.trial_id] = True
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except OSError:
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logging.exception("Could not load rendered config from trial logdir.")
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model_hyperparameters = os.path.join(trial.local_path, "trial_hyperparameters.json")
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if os.path.isfile(model_hyperparameters):
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try:
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with open(model_hyperparameters) as f:
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config = json.load(f)
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assert config, "Trial {trial} user config was empty."
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self.rendered_config[trial.trial_id] = True
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except OSError:
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logging.exception("Could not load rendered config from trial logdir.")
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def run_hyperopt_executor(
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search_alg,
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executor,
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epochs,
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csv_filename,
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tmpdir,
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validate_output_feature=False,
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validation_metric=None,
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use_split=True,
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):
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config = _get_config(search_alg, executor, epochs)
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rel_path = generate_data(config["input_features"], config["output_features"], csv_filename)
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if not use_split:
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df = pd.read_csv(rel_path)
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df["split"] = 0
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df.to_csv(rel_path)
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config = ModelConfig.from_dict(config).to_dict()
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hyperopt_config = config["hyperopt"]
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if validate_output_feature:
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hyperopt_config["output_feature"] = config["output_features"][0]["name"]
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if validation_metric:
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hyperopt_config["validation_metric"] = validation_metric
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backend = initialize_backend("local")
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update_hyperopt_params_with_defaults(hyperopt_config)
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if hyperopt_config[EXECUTOR].get(MAX_CONCURRENT_TRIALS) == AUTO:
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hyperopt_config[EXECUTOR][MAX_CONCURRENT_TRIALS] = backend.max_concurrent_trials(hyperopt_config)
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parameters = hyperopt_config["parameters"]
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if search_alg.get("type", "") == "bohb":
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# bohb does not support grid_search search space
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del parameters["utterance.encoder.norm"]
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hyperopt_config["parameters"] = parameters
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split = hyperopt_config["split"]
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output_feature = hyperopt_config["output_feature"]
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metric = hyperopt_config["metric"]
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goal = hyperopt_config["goal"]
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search_alg = hyperopt_config["search_alg"]
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executor = hyperopt_config["executor"]
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hyperopt_executor = get_build_hyperopt_executor(executor["type"])(
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parameters, output_feature, metric, goal, split, search_alg=search_alg, **executor
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)
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hyperopt_executor.execute(config, dataset=rel_path, output_directory=tmpdir, backend=backend)
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@pytest.mark.slow
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@pytest.mark.distributed
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@pytest.mark.distributed_c
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@pytest.mark.parametrize("scenario", SCENARIOS)
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def test_hyperopt_executor(scenario, csv_filename, tmpdir, ray_cluster_4cpu):
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search_alg = scenario["search_alg"]
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executor = scenario["executor"]
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scheduler = executor.get("scheduler", {})
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if scheduler.get("type") == "hb_bohb":
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# When using the hb_bohb scheduler, num_epochs must equal max_t
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epochs = scheduler.get("max_t", 81)
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else:
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epochs = 1
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run_hyperopt_executor(search_alg, executor, epochs, csv_filename, tmpdir)
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@pytest.mark.slow
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@pytest.mark.distributed
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@pytest.mark.distributed_c
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@pytest.mark.parametrize("use_split", [True, False], ids=["split", "no_split"])
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def test_hyperopt_executor_with_metric(use_split, csv_filename, tmpdir, ray_cluster_4cpu):
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run_hyperopt_executor(
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{"type": "variant_generator"}, # search_alg
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{"type": "ray", "num_samples": 2}, # executor
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1,
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csv_filename,
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tmpdir,
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validate_output_feature=True,
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validation_metric=ACCURACY,
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use_split=use_split,
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)
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@pytest.mark.distributed
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@pytest.mark.distributed_c
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@pytest.mark.parametrize(
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"backend",
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[
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"local",
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pytest.param("ray", marks=pytest.mark.xfail(reason="Nested Ray actors exceed 4-CPU CI cluster resources")),
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],
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)
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def test_hyperopt_run_hyperopt(csv_filename, backend, tmpdir, ray_cluster_4cpu):
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input_features = [
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text_feature(name="utterance", encoder={"cell_type": "lstm", "reduce_output": "sum"}),
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category_feature(encoder={"vocab_size": 2}, reduce_input="sum"),
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]
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output_features = [category_feature(decoder={"vocab_size": 2}, reduce_input="sum", output_feature=True)]
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rel_path = generate_data(input_features, output_features, csv_filename)
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config = {
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"input_features": input_features,
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"output_features": output_features,
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"combiner": {"type": "concat"},
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TRAINER: {"train_steps": 3, "learning_rate": 0.001, BATCH_SIZE: 128},
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"backend": {
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"type": backend,
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},
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}
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output_feature_name = output_features[0]["name"]
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hyperopt_configs = {
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"parameters": {
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"trainer.learning_rate": {
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"space": "loguniform",
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"lower": 0.001,
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"upper": 0.1,
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},
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output_feature_name + ".decoder.fc_output_size": {"space": "randint", "lower": 8, "upper": 16},
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output_feature_name + ".decoder.num_fc_layers": {"space": "randint", "lower": 0, "upper": 1},
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},
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"goal": "minimize",
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"output_feature": output_feature_name,
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"validation_metrics": "loss",
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"executor": {
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"type": "ray",
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"num_samples": 2,
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"cpu_resources_per_trial": 1,
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"max_concurrent_trials": 1,
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},
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"search_alg": {"type": "variant_generator"},
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}
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@ray.remote(num_cpus=0)
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class Event:
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def __init__(self):
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self._set = False
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def is_set(self):
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return self._set
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def set(self):
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self._set = True
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# Used to trigger a cancel event in the trial, which should subsequently be retried
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event = Event.remote()
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class CancelCallback(Callback):
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def on_epoch_start(self, trainer, progress_tracker, save_path: str):
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if progress_tracker.epoch == 1 and not ray.get(event.is_set.remote()):
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ray.get(event.set.remote())
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raise KeyboardInterrupt()
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# add hyperopt parameter space to the config
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config["hyperopt"] = hyperopt_configs
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# run for one epoch, then cancel, then resume from where we left off
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run_hyperopt(config, rel_path, tmpdir, callbacks=[CancelCallback()])
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@pytest.mark.slow
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@pytest.mark.distributed
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@pytest.mark.distributed_c
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def test_hyperopt_ray_mlflow(csv_filename, tmpdir, ray_cluster_4cpu):
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mlflow_uri = f"file://{tmpdir}/mlruns"
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mlflow.set_tracking_uri(mlflow_uri)
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client = MlflowClient(tracking_uri=mlflow_uri)
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num_samples = 2
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config = _get_config(
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{"type": "variant_generator"}, # search_alg
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{"type": "ray", "num_samples": num_samples}, # executor
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1, # epochs
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)
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rel_path = generate_data(config["input_features"], config["output_features"], csv_filename)
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exp_name = "mlflow_test"
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run_hyperopt(config, rel_path, tmpdir, experiment_name=exp_name, callbacks=[MlflowCallback(mlflow_uri)])
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experiment = client.get_experiment_by_name(exp_name)
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assert experiment is not None
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runs = client.search_runs([experiment.experiment_id])
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assert len(runs) > 0
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for run in runs:
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artifacts = [f.path for f in client.list_artifacts(run.info.run_id, "")]
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assert "config.yaml" in artifacts
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assert MODEL_FILE_NAME in artifacts
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def run_hyperopt(
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config,
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rel_path,
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tmpdir,
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experiment_name="ray_hyperopt",
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callbacks=None,
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):
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tune_test_callback = HyperoptTestCallback(experiment_name, get_model_type(config))
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hyperopt_results = hyperopt(
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config,
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dataset=rel_path,
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output_directory=tmpdir,
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experiment_name=experiment_name,
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callbacks=callbacks,
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tune_callbacks=[tune_test_callback],
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)
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# check for return results
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assert isinstance(hyperopt_results, HyperoptResults)
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# check for existence of the hyperopt statistics file
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assert os.path.isfile(os.path.join(tmpdir, experiment_name, HYPEROPT_STATISTICS_FILE_NAME))
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# check for evidence that the HyperoptTestCallback was active
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assert len(tune_test_callback.trial_ids) > 0
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for t in tune_test_callback.trial_ids:
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if tune_test_callback.trial_status.get(t) == "terminated":
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assert tune_test_callback.user_config[t].get()
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assert tune_test_callback.rendered_config[t].get()
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