192 lines
6.8 KiB
Python
192 lines
6.8 KiB
Python
"""Graph Bolt DataLoaders"""
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import torch
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import torch.utils.data as torch_data
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from .base import CopyTo
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from .datapipes import (
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datapipe_graph_to_adjlist,
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find_dps,
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replace_dp,
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traverse_dps,
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)
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from .feature_fetcher import FeatureFetcher, FeatureFetcherStartMarker
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from .impl.neighbor_sampler import SamplePerLayer
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from .internal_utils import gb_warning
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from .item_sampler import ItemSampler
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from .minibatch_transformer import MiniBatchTransformer
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__all__ = [
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"DataLoader",
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]
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def _find_and_wrap_parent(datapipe_graph, target_datapipe, wrapper, **kwargs):
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"""Find parent of target_datapipe and wrap it with ."""
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datapipes = find_dps(
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datapipe_graph,
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target_datapipe,
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)
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datapipe_adjlist = datapipe_graph_to_adjlist(datapipe_graph)
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for datapipe in datapipes:
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datapipe_id = id(datapipe)
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for parent_datapipe_id in datapipe_adjlist[datapipe_id][1]:
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parent_datapipe, _ = datapipe_adjlist[parent_datapipe_id]
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datapipe_graph = replace_dp(
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datapipe_graph,
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parent_datapipe,
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wrapper(parent_datapipe, **kwargs),
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)
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return datapipe_graph
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def _set_worker_id(worked_id):
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torch.ops.graphbolt.set_worker_id(worked_id)
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class MultiprocessingWrapper(torch_data.IterDataPipe):
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"""Wraps a datapipe with multiprocessing.
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Parameters
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----------
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datapipe : DataPipe
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The data pipeline.
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num_workers : int, optional
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The number of worker processes. Default is 0, meaning that there
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will be no multiprocessing.
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persistent_workers : bool, optional
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If True, the data loader will not shut down the worker processes after a
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dataset has been consumed once. This allows to maintain the workers
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instances alive.
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"""
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def __init__(self, datapipe, num_workers=0, persistent_workers=True):
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self.datapipe = datapipe
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self.dataloader = torch_data.DataLoader(
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datapipe,
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batch_size=None,
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num_workers=num_workers,
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persistent_workers=(num_workers > 0) and persistent_workers,
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worker_init_fn=_set_worker_id if num_workers > 0 else None,
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)
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def __iter__(self):
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yield from self.dataloader
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class DataLoader(MiniBatchTransformer):
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"""Multiprocessing DataLoader.
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Iterates over the data pipeline with everything before feature fetching
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(i.e. :class:`dgl.graphbolt.FeatureFetcher`) in subprocesses, and
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everything after feature fetching in the main process. The datapipe
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is modified in-place as a result.
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When the copy_to operation is placed earlier in the data pipeline, the
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num_workers argument is required to be 0 as utilizing CUDA in multiple
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worker processes is not supported.
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Parameters
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----------
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datapipe : DataPipe
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The data pipeline.
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num_workers : int, optional
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Number of worker processes. Default is 0.
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persistent_workers : bool, optional
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If True, the data loader will not shut down the worker processes after a
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dataset has been consumed once. This allows to maintain the workers
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instances alive.
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max_uva_threads : int, optional
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Limits the number of CUDA threads used for UVA copies so that the rest
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of the computations can run simultaneously with it. Setting it to a too
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high value will limit the amount of overlap while setting it too low may
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cause the PCI-e bandwidth to not get fully utilized. Manually tuned
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default is 10240, meaning around 5-7 Streaming Multiprocessors.
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"""
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def __init__(
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self,
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datapipe,
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num_workers=0,
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persistent_workers=True,
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max_uva_threads=10240,
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):
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# Multiprocessing requires two modifications to the datapipe:
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#
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# 1. Insert a stage after ItemSampler to distribute the
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# minibatches evenly across processes.
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# 2. Cut the datapipe at FeatureFetcher, and wrap the inner datapipe
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# of the FeatureFetcher with a multiprocessing PyTorch DataLoader.
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datapipe = datapipe.mark_end()
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datapipe_graph = traverse_dps(datapipe)
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if num_workers > 0:
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# (1) Insert minibatch distribution.
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# TODO(BarclayII): Currently I'm using sharding_filter() as a
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# concept demonstration. Later on minibatch distribution should be
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# merged into ItemSampler to maximize efficiency.
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item_samplers = find_dps(
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datapipe_graph,
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ItemSampler,
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)
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for item_sampler in item_samplers:
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datapipe_graph = replace_dp(
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datapipe_graph,
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item_sampler,
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item_sampler.sharding_filter(),
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)
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# (2) Cut datapipe at FeatureFetcher and wrap.
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datapipe_graph = _find_and_wrap_parent(
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datapipe_graph,
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FeatureFetcherStartMarker,
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MultiprocessingWrapper,
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num_workers=num_workers,
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persistent_workers=persistent_workers,
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)
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# (3) Limit the number of UVA threads used if the feature_fetcher
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# or any of the samplers have overlapping optimization enabled.
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if num_workers == 0 and torch.cuda.is_available():
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feature_fetchers = find_dps(
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datapipe_graph,
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FeatureFetcher,
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)
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for feature_fetcher in feature_fetchers:
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if feature_fetcher.max_num_stages > 0: # Overlap enabled.
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torch.ops.graphbolt.set_max_uva_threads(max_uva_threads)
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if num_workers == 0 and torch.cuda.is_available():
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samplers = find_dps(
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datapipe_graph,
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SamplePerLayer,
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)
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for sampler in samplers:
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if sampler.overlap_fetch:
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torch.ops.graphbolt.set_max_uva_threads(max_uva_threads)
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# (4) Cut datapipe at CopyTo and wrap with pinning and prefetching
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# before it. This enables enables non_blocking copies to the device.
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# Prefetching enables the data pipeline up to the CopyTo to run in a
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# separate thread.
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copiers = find_dps(datapipe_graph, CopyTo)
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if len(copiers) > 1:
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gb_warning(
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"Multiple CopyTo operations were found in the datapipe graph."
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" This case is not officially supported."
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)
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for copier in copiers:
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# We enable the prefetch at all times for good CPU only performance.
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datapipe_graph = replace_dp(
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datapipe_graph,
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copier,
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# Add prefetch so that CPU and GPU can run concurrently.
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copier.datapipe.prefetch(2).copy_to(
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copier.device, non_blocking=True
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),
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)
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super().__init__(datapipe)
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