chore: import upstream snapshot with attribution
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import backend as F
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import dgl
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import numpy as np
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from utils import parametrize_idtype
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def create_graph(idtype, num_node):
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g = dgl.graph([])
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g = g.astype(idtype).to(F.ctx())
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g.add_nodes(num_node)
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return g
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@parametrize_idtype
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def test_node_removal(idtype):
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g = create_graph(idtype, 10)
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g.add_edges(0, 0)
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assert g.num_nodes() == 10
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g.ndata["id"] = F.arange(0, 10)
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# remove nodes
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g.remove_nodes(range(4, 7))
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assert g.num_nodes() == 7
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assert F.array_equal(g.ndata["id"], F.tensor([0, 1, 2, 3, 7, 8, 9]))
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assert dgl.NID not in g.ndata
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assert dgl.EID not in g.edata
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# add nodes
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g.add_nodes(3)
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assert g.num_nodes() == 10
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assert F.array_equal(
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g.ndata["id"], F.tensor([0, 1, 2, 3, 7, 8, 9, 0, 0, 0])
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)
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# remove nodes
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g.remove_nodes(range(1, 4), store_ids=True)
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assert g.num_nodes() == 7
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assert F.array_equal(g.ndata["id"], F.tensor([0, 7, 8, 9, 0, 0, 0]))
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assert dgl.NID in g.ndata
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assert dgl.EID in g.edata
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@parametrize_idtype
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def test_multigraph_node_removal(idtype):
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g = create_graph(idtype, 5)
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for i in range(5):
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g.add_edges(i, i)
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g.add_edges(i, i)
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assert g.num_nodes() == 5
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assert g.num_edges() == 10
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# remove nodes
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g.remove_nodes([2, 3])
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assert g.num_nodes() == 3
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assert g.num_edges() == 6
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# add nodes
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g.add_nodes(1)
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g.add_edges(1, 1)
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g.add_edges(1, 1)
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assert g.num_nodes() == 4
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assert g.num_edges() == 8
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# remove nodes
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g.remove_nodes([0])
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assert g.num_nodes() == 3
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assert g.num_edges() == 6
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@parametrize_idtype
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def test_multigraph_edge_removal(idtype):
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g = create_graph(idtype, 5)
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for i in range(5):
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g.add_edges(i, i)
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g.add_edges(i, i)
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assert g.num_nodes() == 5
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assert g.num_edges() == 10
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# remove edges
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g.remove_edges([2, 3])
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assert g.num_nodes() == 5
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assert g.num_edges() == 8
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# add edges
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g.add_edges(1, 1)
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g.add_edges(1, 1)
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assert g.num_nodes() == 5
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assert g.num_edges() == 10
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# remove edges
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g.remove_edges([0, 1])
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assert g.num_nodes() == 5
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assert g.num_edges() == 8
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@parametrize_idtype
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def test_edge_removal(idtype):
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g = create_graph(idtype, 5)
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for i in range(5):
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for j in range(5):
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g.add_edges(i, j)
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g.edata["id"] = F.arange(0, 25)
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# remove edges
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g.remove_edges(range(13, 20))
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assert g.num_nodes() == 5
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assert g.num_edges() == 18
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assert F.array_equal(
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g.edata["id"], F.tensor(list(range(13)) + list(range(20, 25)))
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)
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assert dgl.NID not in g.ndata
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assert dgl.EID not in g.edata
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# add edges
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g.add_edges(3, 3)
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assert g.num_nodes() == 5
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assert g.num_edges() == 19
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assert F.array_equal(
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g.edata["id"], F.tensor(list(range(13)) + list(range(20, 25)) + [0])
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)
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# remove edges
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g.remove_edges(range(2, 10), store_ids=True)
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assert g.num_nodes() == 5
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assert g.num_edges() == 11
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assert F.array_equal(
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g.edata["id"], F.tensor([0, 1, 10, 11, 12, 20, 21, 22, 23, 24, 0])
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)
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assert dgl.EID in g.edata
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@parametrize_idtype
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def test_node_and_edge_removal(idtype):
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g = create_graph(idtype, 10)
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for i in range(10):
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for j in range(10):
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g.add_edges(i, j)
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g.edata["id"] = F.arange(0, 100)
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assert g.num_nodes() == 10
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assert g.num_edges() == 100
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# remove nodes
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g.remove_nodes([2, 4])
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assert g.num_nodes() == 8
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assert g.num_edges() == 64
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# remove edges
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g.remove_edges(range(10, 20))
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assert g.num_nodes() == 8
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assert g.num_edges() == 54
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# add nodes
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g.add_nodes(2)
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assert g.num_nodes() == 10
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assert g.num_edges() == 54
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# add edges
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for i in range(8, 10):
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for j in range(8, 10):
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g.add_edges(i, j)
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assert g.num_nodes() == 10
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assert g.num_edges() == 58
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# remove edges
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g.remove_edges(range(10, 20))
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assert g.num_nodes() == 10
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assert g.num_edges() == 48
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@parametrize_idtype
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def test_node_frame(idtype):
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g = create_graph(idtype, 10)
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data = np.random.rand(10, 3)
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new_data = data.take([0, 1, 2, 7, 8, 9], axis=0)
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g.ndata["h"] = F.tensor(data)
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# remove nodes
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g.remove_nodes(range(3, 7))
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assert F.allclose(g.ndata["h"], F.tensor(new_data))
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@parametrize_idtype
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def test_edge_frame(idtype):
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g = create_graph(idtype, 10)
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g.add_edges(list(range(10)), list(range(1, 10)) + [0])
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data = np.random.rand(10, 3)
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new_data = data.take([0, 1, 2, 7, 8, 9], axis=0)
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g.edata["h"] = F.tensor(data)
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# remove edges
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g.remove_edges(range(3, 7))
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assert F.allclose(g.edata["h"], F.tensor(new_data))
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@parametrize_idtype
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def test_issue1287(idtype):
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# reproduce https://github.com/dmlc/dgl/issues/1287.
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# setting features after remove nodes
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g = create_graph(idtype, 5)
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g.add_edges([0, 2, 3, 1, 1], [1, 0, 3, 1, 0])
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g.remove_nodes([0, 1])
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g.ndata["h"] = F.randn((g.num_nodes(), 3))
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g.edata["h"] = F.randn((g.num_edges(), 2))
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# remove edges
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g = create_graph(idtype, 5)
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g.add_edges([0, 2, 3, 1, 1], [1, 0, 3, 1, 0])
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g.remove_edges([0, 1])
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g = g.to(F.ctx())
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g.ndata["h"] = F.randn((g.num_nodes(), 3))
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g.edata["h"] = F.randn((g.num_edges(), 2))
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if __name__ == "__main__":
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test_node_removal()
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test_edge_removal()
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test_multigraph_node_removal()
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test_multigraph_edge_removal()
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test_node_and_edge_removal()
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test_node_frame()
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test_edge_frame()
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test_frame_size()
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