chore: import upstream snapshot with attribution

This commit is contained in:
wehub-resource-sync
2026-07-13 13:35:51 +08:00
commit c36a561cd8
2172 changed files with 455595 additions and 0 deletions
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import unittest
import backend as F
import dgl
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch",
reason="Only supports PyTorch backend.",
)
def test_roman_empire():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.RomanEmpireDataset(force_reload=True)[0]
assert g.num_nodes() == 22662
assert g.num_edges() == 65854
g2 = dgl.data.RomanEmpireDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch",
reason="Only supports PyTorch backend.",
)
def test_amazon_ratings():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.AmazonRatingsDataset(force_reload=True)[0]
assert g.num_nodes() == 24492
assert g.num_edges() == 186100
g2 = dgl.data.AmazonRatingsDataset(force_reload=True, transform=transform)[
0
]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch",
reason="Only supports PyTorch backend.",
)
def test_minesweeper():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.MinesweeperDataset(force_reload=True)[0]
assert g.num_nodes() == 10000
assert g.num_edges() == 78804
g2 = dgl.data.MinesweeperDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch",
reason="Only supports PyTorch backend.",
)
def test_tolokers():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.TolokersDataset(force_reload=True)[0]
assert g.num_nodes() == 11758
assert g.num_edges() == 1038000
g2 = dgl.data.TolokersDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch",
reason="Only supports PyTorch backend.",
)
def test_questions():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.QuestionsDataset(force_reload=True)[0]
assert g.num_nodes() == 48921
assert g.num_edges() == 307080
g2 = dgl.data.QuestionsDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
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import unittest
import backend as F
import dgl
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch", reason="only supports pytorch"
)
def test_actor():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.ActorDataset(force_reload=True)[0]
assert g.num_nodes() == 7600
assert g.num_edges() == 33391
g2 = dgl.data.ActorDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
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import unittest
import backend as F
import dgl
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch", reason="only supports pytorch"
)
def test_chameleon():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.ChameleonDataset(force_reload=True)[0]
assert g.num_nodes() == 2277
assert g.num_edges() == 36101
g2 = dgl.data.ChameleonDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch", reason="only supports pytorch"
)
def test_squirrel():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.SquirrelDataset(force_reload=True)[0]
assert g.num_nodes() == 5201
assert g.num_edges() == 217073
g2 = dgl.data.SquirrelDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch", reason="only supports pytorch"
)
def test_cornell():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.CornellDataset(force_reload=True)[0]
assert g.num_nodes() == 183
assert g.num_edges() == 298
g2 = dgl.data.CornellDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch", reason="only supports pytorch"
)
def test_texas():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.TexasDataset(force_reload=True)[0]
assert g.num_nodes() == 183
assert g.num_edges() == 325
g2 = dgl.data.TexasDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch", reason="only supports pytorch"
)
def test_wisconsin():
transform = dgl.AddSelfLoop(allow_duplicate=True)
g = dgl.data.WisconsinDataset(force_reload=True)[0]
assert g.num_nodes() == 251
assert g.num_edges() == 515
g2 = dgl.data.WisconsinDataset(force_reload=True, transform=transform)[0]
assert g2.num_edges() - g.num_edges() == g.num_nodes()
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import unittest
import backend as F
import dgl
from dgl.data.movielens import MovieLensDataset
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(
dgl.backend.backend_name != "pytorch", reason="only supports pytorch"
)
def test_movielens():
transform = dgl.AddSelfLoop(new_etypes=True)
movielens = MovieLensDataset(name="ml-100k", valid_ratio=0.2, verbose=True)
g = movielens[0]
assert g.num_edges("user-movie") == g.num_edges("movie-user") == 100000
assert (
g.nodes["user"].data["feat"].shape[1]
== g.nodes["user"].data["feat"].shape[1]
== g.nodes["user"].data["feat"].shape[1]
== 23
)
assert (
g.nodes["movie"].data["feat"].shape[1]
== g.nodes["movie"].data["feat"].shape[1]
== g.nodes["movie"].data["feat"].shape[1]
== 320
)
movielens = MovieLensDataset(
name="ml-100k", valid_ratio=0.2, transform=transform, verbose=True
)
g1 = movielens[0]
assert g1.num_edges() - g.num_edges() == g.num_nodes()
assert g1.num_edges() - g.num_edges() == g.num_nodes()
assert g1.num_edges() - g.num_edges() == g.num_nodes()
movielens = MovieLensDataset(
name="ml-1m", valid_ratio=0.2, test_ratio=0.1, verbose=True
)
g = movielens[0]
assert g.num_edges("user-movie") == g.num_edges("movie-user") == 1000209
movielens = MovieLensDataset(
name="ml-10m", valid_ratio=0.2, test_ratio=0.1, verbose=True
)
g = movielens[0]
assert g.num_edges("user-movie") == g.num_edges("movie-user") == 10000054
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import os
import tempfile
import time
import unittest
import warnings
import backend as F
import dgl
import dgl.ndarray as nd
import numpy as np
import pytest
import scipy as sp
from dgl.data.utils import load_labels, load_tensors, save_tensors
np.random.seed(44)
def generate_rand_graph(n):
arr = (sp.sparse.random(n, n, density=0.1, format="coo") != 0).astype(
np.int64
)
return dgl.from_scipy(arr)
def construct_graph(n):
g_list = []
for _ in range(n):
g = generate_rand_graph(30)
g.edata["e1"] = F.randn((g.num_edges(), 32))
g.edata["e2"] = F.ones((g.num_edges(), 32))
g.ndata["n1"] = F.randn((g.num_nodes(), 64))
g_list.append(g)
return g_list
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
def test_graph_serialize_with_feature():
num_graphs = 100
t0 = time.time()
g_list = construct_graph(num_graphs)
t1 = time.time()
# create a temporary file and immediately release it so DGL can open it.
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
dgl.save_graphs(path, g_list)
t2 = time.time()
idx_list = np.random.permutation(np.arange(num_graphs)).tolist()
loadg_list, _ = dgl.load_graphs(path, idx_list)
t3 = time.time()
idx = idx_list[0]
load_g = loadg_list[0]
print("Save time: {} s".format(t2 - t1))
print("Load time: {} s".format(t3 - t2))
print("Graph Construction time: {} s".format(t1 - t0))
assert F.allclose(load_g.nodes(), g_list[idx].nodes())
load_edges = load_g.all_edges("uv", "eid")
g_edges = g_list[idx].all_edges("uv", "eid")
assert F.allclose(load_edges[0], g_edges[0])
assert F.allclose(load_edges[1], g_edges[1])
assert F.allclose(load_g.edata["e1"], g_list[idx].edata["e1"])
assert F.allclose(load_g.edata["e2"], g_list[idx].edata["e2"])
assert F.allclose(load_g.ndata["n1"], g_list[idx].ndata["n1"])
os.unlink(path)
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
def test_graph_serialize_without_feature():
num_graphs = 100
g_list = [generate_rand_graph(30) for _ in range(num_graphs)]
# create a temporary file and immediately release it so DGL can open it.
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
dgl.save_graphs(path, g_list)
idx_list = np.random.permutation(np.arange(num_graphs)).tolist()
loadg_list, _ = dgl.load_graphs(path, idx_list)
idx = idx_list[0]
load_g = loadg_list[0]
assert F.allclose(load_g.nodes(), g_list[idx].nodes())
load_edges = load_g.all_edges("uv", "eid")
g_edges = g_list[idx].all_edges("uv", "eid")
assert F.allclose(load_edges[0], g_edges[0])
assert F.allclose(load_edges[1], g_edges[1])
os.unlink(path)
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
def test_graph_serialize_with_labels():
num_graphs = 100
g_list = [generate_rand_graph(30) for _ in range(num_graphs)]
labels = {"label": F.zeros((num_graphs, 1))}
# create a temporary file and immediately release it so DGL can open it.
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
dgl.save_graphs(path, g_list, labels)
idx_list = np.random.permutation(np.arange(num_graphs)).tolist()
loadg_list, l_labels0 = dgl.load_graphs(path, idx_list)
l_labels = load_labels(path)
assert F.allclose(l_labels["label"], labels["label"])
assert F.allclose(l_labels0["label"], labels["label"])
idx = idx_list[0]
load_g = loadg_list[0]
assert F.allclose(load_g.nodes(), g_list[idx].nodes())
load_edges = load_g.all_edges("uv", "eid")
g_edges = g_list[idx].all_edges("uv", "eid")
assert F.allclose(load_edges[0], g_edges[0])
assert F.allclose(load_edges[1], g_edges[1])
os.unlink(path)
def test_serialize_tensors():
# create a temporary file and immediately release it so DGL can open it.
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
tensor_dict = {
"a": F.tensor([1, 3, -1, 0], dtype=F.int64),
"1@1": F.tensor([1.5, 2], dtype=F.float32),
}
save_tensors(path, tensor_dict)
load_tensor_dict = load_tensors(path)
for key in tensor_dict:
assert key in load_tensor_dict
assert np.array_equal(
F.asnumpy(load_tensor_dict[key]), F.asnumpy(tensor_dict[key])
)
load_nd_dict = load_tensors(path, return_dgl_ndarray=True)
for key in tensor_dict:
assert key in load_nd_dict
assert isinstance(load_nd_dict[key], nd.NDArray)
assert np.array_equal(
load_nd_dict[key].asnumpy(), F.asnumpy(tensor_dict[key])
)
os.unlink(path)
def test_serialize_empty_dict():
# create a temporary file and immediately release it so DGL can open it.
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
tensor_dict = {}
save_tensors(path, tensor_dict)
load_tensor_dict = load_tensors(path)
assert isinstance(load_tensor_dict, dict)
assert len(load_tensor_dict) == 0
os.unlink(path)
def load_old_files(files):
with warnings.catch_warnings():
warnings.simplefilter("ignore", category=UserWarning)
return dgl.load_graphs(os.path.join(os.path.dirname(__file__), files))
def test_load_old_files1():
loadg_list, _ = load_old_files("data/1.bin")
idx, num_nodes, edge0, edge1, edata_e1, edata_e2, ndata_n1 = np.load(
os.path.join(os.path.dirname(__file__), "data/1.npy"), allow_pickle=True
)
load_g = loadg_list[idx]
load_edges = load_g.all_edges("uv", "eid")
assert np.allclose(F.asnumpy(load_edges[0]), edge0)
assert np.allclose(F.asnumpy(load_edges[1]), edge1)
assert np.allclose(F.asnumpy(load_g.edata["e1"]), edata_e1)
assert np.allclose(F.asnumpy(load_g.edata["e2"]), edata_e2)
assert np.allclose(F.asnumpy(load_g.ndata["n1"]), ndata_n1)
def test_load_old_files2():
loadg_list, labels0 = load_old_files("data/2.bin")
labels1 = load_labels(os.path.join(os.path.dirname(__file__), "data/2.bin"))
idx, edges0, edges1, np_labels = np.load(
os.path.join(os.path.dirname(__file__), "data/2.npy"), allow_pickle=True
)
assert np.allclose(F.asnumpy(labels0["label"]), np_labels)
assert np.allclose(F.asnumpy(labels1["label"]), np_labels)
load_g = loadg_list[idx]
print(load_g)
load_edges = load_g.all_edges("uv", "eid")
assert np.allclose(F.asnumpy(load_edges[0]), edges0)
assert np.allclose(F.asnumpy(load_edges[1]), edges1)
def create_heterographs(idtype):
g_x = dgl.heterograph(
{("user", "follows", "user"): ([0, 1, 2], [1, 2, 3])}, idtype=idtype
)
g_y = dgl.heterograph(
{("user", "knows", "user"): ([0, 2], [2, 3])}, idtype=idtype
).formats("csr")
g_x.ndata["h"] = F.randn((4, 3))
g_x.edata["w"] = F.randn((3, 2))
g_y.ndata["hh"] = F.ones((4, 5))
g_y.edata["ww"] = F.randn((2, 10))
g = dgl.heterograph(
{
("user", "follows", "user"): ([0, 1, 2], [1, 2, 3]),
("user", "knows", "user"): ([0, 2], [2, 3]),
},
idtype=idtype,
)
g.nodes["user"].data["h"] = g_x.ndata["h"]
g.nodes["user"].data["hh"] = g_y.ndata["hh"]
g.edges["follows"].data["w"] = g_x.edata["w"]
g.edges["knows"].data["ww"] = g_y.edata["ww"]
return [g, g_x, g_y]
def create_heterographs2(idtype):
g_x = dgl.heterograph(
{("user", "follows", "user"): ([0, 1, 2], [1, 2, 3])}, idtype=idtype
)
g_y = dgl.heterograph(
{("user", "knows", "user"): ([0, 2], [2, 3])}, idtype=idtype
).formats("csr")
g_z = dgl.heterograph(
{("user", "knows", "knowledge"): ([0, 1, 3], [2, 3, 4])}, idtype=idtype
)
g_x.ndata["h"] = F.randn((4, 3))
g_x.edata["w"] = F.randn((3, 2))
g_y.ndata["hh"] = F.ones((4, 5))
g_y.edata["ww"] = F.randn((2, 10))
g = dgl.heterograph(
{
("user", "follows", "user"): ([0, 1, 2], [1, 2, 3]),
("user", "knows", "user"): ([0, 2], [2, 3]),
("user", "knows", "knowledge"): ([0, 1, 3], [2, 3, 4]),
},
idtype=idtype,
)
g.nodes["user"].data["h"] = g_x.ndata["h"]
g.edges["follows"].data["w"] = g_x.edata["w"]
g.nodes["user"].data["hh"] = g_y.ndata["hh"]
g.edges[("user", "knows", "user")].data["ww"] = g_y.edata["ww"]
return [g, g_x, g_y, g_z]
def test_deserialize_old_heterograph_file():
path = os.path.join(os.path.dirname(__file__), "data/hetero1.bin")
g_list, label_dict = dgl.load_graphs(path)
assert g_list[0].idtype == F.int64
assert g_list[3].idtype == F.int32
assert np.allclose(
F.asnumpy(g_list[2].nodes["user"].data["hh"]), np.ones((4, 5))
)
assert np.allclose(
F.asnumpy(g_list[5].nodes["user"].data["hh"]), np.ones((4, 5))
)
edges = g_list[0]["follows"].edges()
assert np.allclose(F.asnumpy(edges[0]), np.array([0, 1, 2]))
assert np.allclose(F.asnumpy(edges[1]), np.array([1, 2, 3]))
assert F.allclose(label_dict["graph_label"], F.ones(54))
def create_old_heterograph_files():
path = os.path.join(os.path.dirname(__file__), "data/hetero1.bin")
g_list0 = create_heterographs(F.int64) + create_heterographs(F.int32)
labels_dict = {"graph_label": F.ones(54)}
dgl.save_graphs(path, g_list0, labels_dict)
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
def test_serialize_heterograph():
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
g_list0 = create_heterographs2(F.int64) + create_heterographs2(F.int32)
dgl.save_graphs(path, g_list0)
g_list, _ = dgl.load_graphs(path)
assert g_list[0].idtype == F.int64
assert len(g_list[0].canonical_etypes) == 3
for i in range(len(g_list0)):
for j, etypes in enumerate(g_list0[i].canonical_etypes):
assert g_list[i].canonical_etypes[j] == etypes
# assert g_list[1].restrict_format() == 'any'
# assert g_list[2].restrict_format() == 'csr'
assert g_list[4].idtype == F.int32
assert np.allclose(
F.asnumpy(g_list[2].nodes["user"].data["hh"]), np.ones((4, 5))
)
assert np.allclose(
F.asnumpy(g_list[6].nodes["user"].data["hh"]), np.ones((4, 5))
)
edges = g_list[0]["follows"].edges()
assert np.allclose(F.asnumpy(edges[0]), np.array([0, 1, 2]))
assert np.allclose(F.asnumpy(edges[1]), np.array([1, 2, 3]))
for i in range(len(g_list)):
assert g_list[i].ntypes == g_list0[i].ntypes
assert g_list[i].etypes == g_list0[i].etypes
# test set feature after load_graph
g_list[3].nodes["user"].data["test"] = F.tensor([0, 1, 2, 4])
g_list[3].edata["test"] = F.tensor([0, 1, 2])
os.unlink(path)
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
@pytest.mark.skip(reason="lack of permission on CI")
def test_serialize_heterograph_s3():
path = "s3://dglci-data-test/graph2.bin"
g_list0 = create_heterographs(F.int64) + create_heterographs(F.int32)
dgl.save_graphs(path, g_list0)
g_list = dgl.load_graphs(path, [0, 2, 5])
assert g_list[0].idtype == F.int64
# assert g_list[1].restrict_format() == 'csr'
assert np.allclose(
F.asnumpy(g_list[1].nodes["user"].data["hh"]), np.ones((4, 5))
)
assert np.allclose(
F.asnumpy(g_list[2].nodes["user"].data["hh"]), np.ones((4, 5))
)
edges = g_list[0]["follows"].edges()
assert np.allclose(F.asnumpy(edges[0]), np.array([0, 1, 2]))
assert np.allclose(F.asnumpy(edges[1]), np.array([1, 2, 3]))
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
@pytest.mark.parametrize(
"formats",
[
"coo",
"csr",
"csc",
["coo", "csc"],
["coo", "csr"],
["csc", "csr"],
["coo", "csr", "csc"],
],
)
def test_graph_serialize_with_formats(formats):
num_graphs = 100
g_list = [generate_rand_graph(30) for _ in range(num_graphs)]
# create a temporary file and immediately release it so DGL can open it.
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
dgl.save_graphs(path, g_list, formats=formats)
idx_list = np.random.permutation(np.arange(num_graphs)).tolist()
loadg_list, _ = dgl.load_graphs(path, idx_list)
idx = idx_list[0]
load_g = loadg_list[0]
g_formats = load_g.formats()
# verify formats
if not isinstance(formats, list):
formats = [formats]
for fmt in formats:
assert fmt in g_formats["created"]
assert F.allclose(load_g.nodes(), g_list[idx].nodes())
load_edges = load_g.all_edges("uv", "eid")
g_edges = g_list[idx].all_edges("uv", "eid")
assert F.allclose(load_edges[0], g_edges[0])
assert F.allclose(load_edges[1], g_edges[1])
os.unlink(path)
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
def test_graph_serialize_with_restricted_formats():
g = dgl.rand_graph(100, 200)
g = g.formats(["coo"])
g_list = [g]
# create a temporary file and immediately release it so DGL can open it.
f = tempfile.NamedTemporaryFile(delete=False)
path = f.name
f.close()
expect_except = False
try:
dgl.save_graphs(path, g_list, formats=["csr"])
except:
expect_except = True
assert expect_except
os.unlink(path)
@unittest.skipIf(F._default_context_str == "gpu", reason="GPU not implemented")
def test_deserialize_old_graph():
num_nodes = 100
num_edges = 200
path = os.path.join(os.path.dirname(__file__), "data/graph_0.9a220622.dgl")
g_list, _ = dgl.load_graphs(path)
g = g_list[0]
assert "coo" in g.formats()["created"]
assert "csr" in g.formats()["not created"]
assert "csc" in g.formats()["not created"]
assert num_nodes == g.num_nodes()
assert num_edges == g.num_edges()
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import gzip
import io
import os
import tarfile
import tempfile
import unittest
import backend as F
import dgl
import dgl.data as data
import numpy as np
import pandas as pd
import pytest
import yaml
from dgl import DGLError
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(dgl.backend.backend_name == "mxnet", reason="Skip MXNet")
def test_add_nodepred_split():
dataset = data.AmazonCoBuyComputerDataset()
print("train_mask" in dataset[0].ndata)
data.utils.add_nodepred_split(dataset, [0.8, 0.1, 0.1])
assert "train_mask" in dataset[0].ndata
dataset = data.AIFBDataset()
print("train_mask" in dataset[0].nodes["Publikationen"].data)
data.utils.add_nodepred_split(
dataset, [0.8, 0.1, 0.1], ntype="Publikationen"
)
assert "train_mask" in dataset[0].nodes["Publikationen"].data
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(dgl.backend.backend_name == "mxnet", reason="Skip MXNet")
def test_extract_archive():
# gzip
with tempfile.TemporaryDirectory() as src_dir:
gz_file = "gz_archive"
gz_path = os.path.join(src_dir, gz_file + ".gz")
content = b"test extract archive gzip"
with gzip.open(gz_path, "wb") as f:
f.write(content)
with tempfile.TemporaryDirectory() as dst_dir:
data.utils.extract_archive(gz_path, dst_dir, overwrite=True)
assert os.path.exists(os.path.join(dst_dir, gz_file))
# tar
with tempfile.TemporaryDirectory() as src_dir:
tar_file = "tar_archive"
tar_path = os.path.join(src_dir, tar_file + ".tar")
# default encode to utf8
content = "test extract archive tar\n".encode()
info = tarfile.TarInfo(name="tar_archive")
info.size = len(content)
with tarfile.open(tar_path, "w") as f:
f.addfile(info, io.BytesIO(content))
with tempfile.TemporaryDirectory() as dst_dir:
data.utils.extract_archive(tar_path, dst_dir, overwrite=True)
assert os.path.exists(os.path.join(dst_dir, tar_file))
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(dgl.backend.backend_name == "mxnet", reason="Skip MXNet")
def test_mask_nodes_by_property():
num_nodes = 1000
property_values = np.random.uniform(size=num_nodes)
part_ratios = [0.3, 0.1, 0.1, 0.3, 0.2]
split_masks = data.utils.mask_nodes_by_property(
property_values, part_ratios
)
assert "in_valid_mask" in split_masks
@unittest.skipIf(
F._default_context_str == "gpu",
reason="Datasets don't need to be tested on GPU.",
)
@unittest.skipIf(dgl.backend.backend_name == "mxnet", reason="Skip MXNet")
def test_add_node_property_split():
dataset = data.AmazonCoBuyComputerDataset()
part_ratios = [0.3, 0.1, 0.1, 0.3, 0.2]
for property_name in ["popularity", "locality", "density"]:
data.utils.add_node_property_split(dataset, part_ratios, property_name)
assert "in_valid_mask" in dataset[0].ndata
if __name__ == "__main__":
test_extract_archive()
test_add_nodepred_split()
test_mask_nodes_by_property()
test_add_node_property_split()