chore: import upstream snapshot with attribution
This commit is contained in:
@@ -0,0 +1,125 @@
|
||||
"""Torch Module for DenseChebConv"""
|
||||
# pylint: disable= no-member, arguments-differ, invalid-name
|
||||
import torch as th
|
||||
from torch import nn
|
||||
from torch.nn import init
|
||||
|
||||
|
||||
class DenseChebConv(nn.Module):
|
||||
r"""Chebyshev Spectral Graph Convolution layer from `Convolutional
|
||||
Neural Networks on Graphs with Fast Localized Spectral Filtering
|
||||
<https://arxiv.org/pdf/1606.09375.pdf>`__
|
||||
|
||||
We recommend to use this module when applying ChebConv on dense graphs.
|
||||
|
||||
Parameters
|
||||
----------
|
||||
in_feats: int
|
||||
Dimension of input features :math:`h_i^{(l)}`.
|
||||
out_feats: int
|
||||
Dimension of output features :math:`h_i^{(l+1)}`.
|
||||
k : int
|
||||
Chebyshev filter size.
|
||||
activation : function, optional
|
||||
Activation function, default is ReLu.
|
||||
bias : bool, optional
|
||||
If True, adds a learnable bias to the output. Default: ``True``.
|
||||
|
||||
Example
|
||||
-------
|
||||
>>> import dgl
|
||||
>>> import numpy as np
|
||||
>>> import torch as th
|
||||
>>> from dgl.nn import DenseChebConv
|
||||
>>>
|
||||
>>> feat = th.ones(6, 10)
|
||||
>>> adj = th.tensor([[0., 0., 1., 0., 0., 0.],
|
||||
... [1., 0., 0., 0., 0., 0.],
|
||||
... [0., 1., 0., 0., 0., 0.],
|
||||
... [0., 0., 1., 0., 0., 1.],
|
||||
... [0., 0., 0., 1., 0., 0.],
|
||||
... [0., 0., 0., 0., 0., 0.]])
|
||||
>>> conv = DenseChebConv(10, 2, 2)
|
||||
>>> res = conv(adj, feat)
|
||||
>>> res
|
||||
tensor([[-3.3516, -2.4797],
|
||||
[-3.3516, -2.4797],
|
||||
[-3.3516, -2.4797],
|
||||
[-4.5192, -3.0835],
|
||||
[-2.5259, -2.0527],
|
||||
[-0.5327, -1.0219]], grad_fn=<AddBackward0>)
|
||||
|
||||
See also
|
||||
--------
|
||||
`ChebConv <https://docs.dgl.ai/api/python/nn.pytorch.html#chebconv>`__
|
||||
"""
|
||||
|
||||
def __init__(self, in_feats, out_feats, k, bias=True):
|
||||
super(DenseChebConv, self).__init__()
|
||||
self._in_feats = in_feats
|
||||
self._out_feats = out_feats
|
||||
self._k = k
|
||||
self.W = nn.Parameter(th.Tensor(k, in_feats, out_feats))
|
||||
if bias:
|
||||
self.bias = nn.Parameter(th.Tensor(out_feats))
|
||||
else:
|
||||
self.register_buffer("bias", None)
|
||||
self.reset_parameters()
|
||||
|
||||
def reset_parameters(self):
|
||||
"""Reinitialize learnable parameters."""
|
||||
if self.bias is not None:
|
||||
init.zeros_(self.bias)
|
||||
for i in range(self._k):
|
||||
init.xavier_normal_(self.W[i], init.calculate_gain("relu"))
|
||||
|
||||
def forward(self, adj, feat, lambda_max=None):
|
||||
r"""Compute (Dense) Chebyshev Spectral Graph Convolution layer
|
||||
|
||||
Parameters
|
||||
----------
|
||||
adj : torch.Tensor
|
||||
The adjacency matrix of the graph to apply Graph Convolution on,
|
||||
should be of shape :math:`(N, N)`, where a row represents the destination
|
||||
and a column represents the source.
|
||||
feat : torch.Tensor
|
||||
The input feature of shape :math:`(N, D_{in})` where :math:`D_{in}`
|
||||
is size of input feature, :math:`N` is the number of nodes.
|
||||
lambda_max : float or None, optional
|
||||
A float value indicates the largest eigenvalue of given graph.
|
||||
Default: None.
|
||||
|
||||
Returns
|
||||
-------
|
||||
torch.Tensor
|
||||
The output feature of shape :math:`(N, D_{out})` where :math:`D_{out}`
|
||||
is size of output feature.
|
||||
"""
|
||||
A = adj.to(feat)
|
||||
num_nodes = A.shape[0]
|
||||
|
||||
in_degree = 1 / A.sum(dim=1).clamp(min=1).sqrt()
|
||||
D_invsqrt = th.diag(in_degree)
|
||||
I = th.eye(num_nodes).to(A)
|
||||
L = I - D_invsqrt @ A @ D_invsqrt
|
||||
|
||||
if lambda_max is None:
|
||||
lambda_ = th.eig(L)[0][:, 0]
|
||||
lambda_max = lambda_.max()
|
||||
|
||||
L_hat = 2 * L / lambda_max - I
|
||||
Z = [th.eye(num_nodes).to(A)]
|
||||
for i in range(1, self._k):
|
||||
if i == 1:
|
||||
Z.append(L_hat)
|
||||
else:
|
||||
Z.append(2 * L_hat @ Z[-1] - Z[-2])
|
||||
|
||||
Zs = th.stack(Z, 0) # (k, n, n)
|
||||
|
||||
Zh = Zs @ feat.unsqueeze(0) @ self.W
|
||||
Zh = Zh.sum(0)
|
||||
|
||||
if self.bias is not None:
|
||||
Zh = Zh + self.bias
|
||||
return Zh
|
||||
Reference in New Issue
Block a user