0ef5fcb1c5
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496 lines
16 KiB
Python
496 lines
16 KiB
Python
"""OSS Benchmark Evaluations for HTML Content Extraction.
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This module evaluates HTMLExtractor against established open-source benchmarks:
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1. **Scrapinghub Article Extraction Benchmark** (HuggingFace: allenai/scrapinghub-article-extraction-benchmark)
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- 181 HTML pages with ground truth article bodies
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- Measures extraction F1 score (precision, recall)
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- trafilatura baseline: 0.958 F1
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2. **WebSRC Reading Comprehension** (HuggingFace: X-LANCE/WebSRC_v1.0)
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- 400K Q&A pairs on 6.4K web pages with HTML
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- Measures whether extraction preserves QA accuracy
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- Tests: Original HTML vs Extracted content → same answer?
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The goal is to prove that HTMLExtractor does NOT lose accuracy while achieving
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significant compression by removing structural noise.
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References:
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- https://github.com/scrapinghub/article-extraction-benchmark
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- https://huggingface.co/datasets/allenai/scrapinghub-article-extraction-benchmark
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- https://huggingface.co/datasets/X-LANCE/WebSRC_v1.0
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"""
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from __future__ import annotations
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import logging
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import re
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from collections import Counter
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from dataclasses import dataclass, field
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from typing import Any
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logger = logging.getLogger(__name__)
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# ============================================================================
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# Metrics (from established NLP evaluation)
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# ============================================================================
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def tokenize(text: str) -> list[str]:
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"""Simple word tokenization for F1 calculation."""
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return re.findall(r"\b\w+\b", text.lower())
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def compute_f1(prediction: str, ground_truth: str) -> tuple[float, float, float]:
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"""Compute token-level precision, recall, F1.
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This is the standard metric used in article extraction benchmarks.
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Returns:
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Tuple of (precision, recall, f1)
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"""
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pred_tokens = tokenize(prediction)
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truth_tokens = tokenize(ground_truth)
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if not pred_tokens or not truth_tokens:
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return 0.0, 0.0, 0.0
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pred_counter = Counter(pred_tokens)
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truth_counter = Counter(truth_tokens)
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common = sum((pred_counter & truth_counter).values())
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if common == 0:
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return 0.0, 0.0, 0.0
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precision = common / len(pred_tokens)
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recall = common / len(truth_tokens)
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f1 = 2 * precision * recall / (precision + recall)
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return precision, recall, f1
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def compute_exact_match(prediction: str, ground_truth: str) -> bool:
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"""Check if answers match after normalization."""
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pred_norm = " ".join(tokenize(prediction))
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truth_norm = " ".join(tokenize(ground_truth))
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return pred_norm == truth_norm
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# ============================================================================
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# Scrapinghub Article Extraction Benchmark
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# ============================================================================
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@dataclass
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class ExtractionBenchmarkResult:
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"""Result from Scrapinghub article extraction benchmark."""
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total_samples: int
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avg_precision: float
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avg_recall: float
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avg_f1: float
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avg_compression_ratio: float
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# Per-sample details
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sample_results: list[dict[str, Any]] = field(default_factory=list)
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# Comparison with baseline
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baseline_f1: float = 0.958 # trafilatura's score on this benchmark
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@property
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def matches_baseline(self) -> bool:
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"""True if our F1 is within 0.02 of baseline."""
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return abs(self.avg_f1 - self.baseline_f1) < 0.02
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@property
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def beats_baseline(self) -> bool:
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"""True if our F1 exceeds baseline."""
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return self.avg_f1 > self.baseline_f1
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def summary(self) -> dict[str, Any]:
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return {
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"total_samples": self.total_samples,
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"avg_precision": round(self.avg_precision, 4),
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"avg_recall": round(self.avg_recall, 4),
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"avg_f1": round(self.avg_f1, 4),
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"baseline_f1": self.baseline_f1,
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"matches_baseline": self.matches_baseline,
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"avg_compression_ratio": round(self.avg_compression_ratio, 4),
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}
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def evaluate_scrapinghub_benchmark(
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extractor: Any = None,
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max_samples: int | None = None,
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) -> ExtractionBenchmarkResult:
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"""Evaluate HTMLExtractor on Scrapinghub Article Extraction Benchmark.
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This benchmark measures how well we extract article body text from HTML.
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The established baseline (trafilatura) achieves 0.958 F1.
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Args:
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extractor: HTMLExtractor instance (creates one if None)
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max_samples: Limit number of samples (for quick testing)
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Returns:
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ExtractionBenchmarkResult with precision, recall, F1 scores
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Example:
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result = evaluate_scrapinghub_benchmark(max_samples=50)
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print(f"F1: {result.avg_f1:.3f} (baseline: {result.baseline_f1})")
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"""
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try:
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from datasets import load_dataset
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except ImportError:
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raise ImportError(
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"HuggingFace datasets required. Install with: pip install datasets"
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) from None
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if extractor is None:
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from headroom.transforms.html_extractor import HTMLExtractor
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extractor = HTMLExtractor()
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# Load the benchmark dataset
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logger.info("Loading Scrapinghub article extraction benchmark...")
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dataset = load_dataset("allenai/scrapinghub-article-extraction-benchmark")
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samples = dataset["train"]
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if max_samples:
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samples = samples.select(range(min(max_samples, len(samples))))
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logger.info(f"Evaluating {len(samples)} samples...")
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precisions = []
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recalls = []
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f1_scores = []
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compression_ratios = []
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sample_results = []
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for i, sample in enumerate(samples):
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html = sample["html"]
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ground_truth = sample["articleBody"]
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url = sample.get("url")
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# Extract using our extractor
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result = extractor.extract(html, url=url)
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extracted = result.extracted
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# Compute metrics
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precision, recall, f1 = compute_f1(extracted, ground_truth)
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precisions.append(precision)
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recalls.append(recall)
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f1_scores.append(f1)
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compression_ratios.append(result.compression_ratio)
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sample_results.append(
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{
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"url": url,
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"precision": precision,
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"recall": recall,
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"f1": f1,
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"compression_ratio": result.compression_ratio,
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"html_length": len(html),
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"extracted_length": len(extracted),
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"ground_truth_length": len(ground_truth),
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}
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)
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if (i + 1) % 20 == 0:
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logger.info(f" Processed {i + 1}/{len(samples)} samples")
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return ExtractionBenchmarkResult(
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total_samples=len(samples),
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avg_precision=sum(precisions) / len(precisions),
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avg_recall=sum(recalls) / len(recalls),
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avg_f1=sum(f1_scores) / len(f1_scores),
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avg_compression_ratio=sum(compression_ratios) / len(compression_ratios),
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sample_results=sample_results,
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)
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# ============================================================================
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# QA Accuracy Preservation Evaluation
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# ============================================================================
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@dataclass
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class QAAccuracyResult:
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"""Result from QA accuracy preservation evaluation."""
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total_questions: int
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# Accuracy on different inputs
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accuracy_original_html: float # Answer from original HTML
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accuracy_extracted: float # Answer from extracted content
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# The key metric: did extraction preserve accuracy?
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accuracy_preserved: bool # True if extracted >= original - 0.02
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# F1 scores
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avg_f1_original: float
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avg_f1_extracted: float
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# Exact match rates
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exact_match_original: float
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exact_match_extracted: float
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# Details
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question_results: list[dict[str, Any]] = field(default_factory=list)
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def summary(self) -> dict[str, Any]:
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return {
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"total_questions": self.total_questions,
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"accuracy_original_html": round(self.accuracy_original_html, 4),
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"accuracy_extracted": round(self.accuracy_extracted, 4),
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"accuracy_preserved": self.accuracy_preserved,
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"accuracy_delta": round(self.accuracy_extracted - self.accuracy_original_html, 4),
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"avg_f1_original": round(self.avg_f1_original, 4),
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"avg_f1_extracted": round(self.avg_f1_extracted, 4),
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}
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def evaluate_qa_accuracy_preservation(
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answer_fn: Any,
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extractor: Any = None,
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max_questions: int = 100,
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dataset_name: str = "squad",
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) -> QAAccuracyResult:
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"""Evaluate whether HTML extraction preserves QA accuracy.
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This test verifies that LLMs can answer questions equally well
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(or better) from extracted content vs original HTML.
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Args:
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answer_fn: Function(context, question) -> answer string
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extractor: HTMLExtractor instance
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max_questions: Number of questions to evaluate
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dataset_name: Which dataset to use ("squad" or "hotpotqa")
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Returns:
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QAAccuracyResult showing whether accuracy is preserved
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"""
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try:
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from datasets import load_dataset
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except ImportError:
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raise ImportError("HuggingFace datasets required") from None
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if extractor is None:
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from headroom.transforms.html_extractor import HTMLExtractor
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extractor = HTMLExtractor()
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# Load QA dataset
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logger.info(f"Loading {dataset_name} dataset...")
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if dataset_name == "squad":
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dataset = load_dataset("rajpurkar/squad_v2", split="validation")
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elif dataset_name == "hotpotqa":
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dataset = load_dataset("hotpotqa/hotpot_qa", "fullwiki", split="validation")
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else:
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raise ValueError(f"Unknown dataset: {dataset_name}")
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# Select subset
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samples = dataset.select(range(min(max_questions, len(dataset))))
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logger.info(f"Evaluating {len(samples)} questions...")
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f1_original = []
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f1_extracted = []
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em_original = []
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em_extracted = []
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question_results = []
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for i, sample in enumerate(samples):
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# Get question and context
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question = sample["question"]
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if dataset_name == "squad":
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context = sample["context"]
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answers = sample["answers"]["text"]
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ground_truth = answers[0] if answers else ""
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else: # hotpotqa
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# Combine supporting facts into context
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context = " ".join(sample.get("context", {}).get("sentences", [""]))
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ground_truth = sample.get("answer", "")
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if not context or not ground_truth:
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continue
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# Wrap context in minimal HTML structure for realistic test
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html_context = f"""<!DOCTYPE html>
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<html>
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<head><title>Document</title></head>
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<body>
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<nav>Navigation Menu | Home | About</nav>
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<article>
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<h1>Content</h1>
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{context}
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</article>
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<footer>Copyright 2024</footer>
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</body>
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</html>"""
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# Extract content
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result = extractor.extract(html_context)
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extracted_context = result.extracted
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# Get answers from both
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try:
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answer_original = answer_fn(html_context, question)
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answer_extracted = answer_fn(extracted_context, question)
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except Exception as e:
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logger.warning(f"Answer generation failed: {e}")
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continue
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# Compute metrics
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_, _, f1_orig = compute_f1(answer_original, ground_truth)
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_, _, f1_ext = compute_f1(answer_extracted, ground_truth)
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em_orig = compute_exact_match(answer_original, ground_truth)
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em_ext = compute_exact_match(answer_extracted, ground_truth)
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f1_original.append(f1_orig)
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f1_extracted.append(f1_ext)
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em_original.append(1.0 if em_orig else 0.0)
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em_extracted.append(1.0 if em_ext else 0.0)
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question_results.append(
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{
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"question": question,
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"ground_truth": ground_truth,
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"answer_original": answer_original,
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"answer_extracted": answer_extracted,
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"f1_original": f1_orig,
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"f1_extracted": f1_ext,
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}
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)
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if (i + 1) % 10 == 0:
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logger.info(f" Processed {i + 1}/{len(samples)} questions")
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if not f1_original:
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raise ValueError("No valid samples processed")
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avg_f1_orig = sum(f1_original) / len(f1_original)
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avg_f1_ext = sum(f1_extracted) / len(f1_extracted)
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avg_em_orig = sum(em_original) / len(em_original)
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avg_em_ext = sum(em_extracted) / len(em_extracted)
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# Accuracy is preserved if extracted is within 2% of original
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accuracy_preserved = avg_f1_ext >= avg_f1_orig - 0.02
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return QAAccuracyResult(
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total_questions=len(f1_original),
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accuracy_original_html=avg_f1_orig,
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accuracy_extracted=avg_f1_ext,
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accuracy_preserved=accuracy_preserved,
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avg_f1_original=avg_f1_orig,
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avg_f1_extracted=avg_f1_ext,
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exact_match_original=avg_em_orig,
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exact_match_extracted=avg_em_ext,
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question_results=question_results,
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)
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# ============================================================================
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# Combined Evaluation Runner
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# ============================================================================
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@dataclass
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class HTMLExtractorBenchmarkSuite:
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"""Complete benchmark suite results."""
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extraction_result: ExtractionBenchmarkResult | None = None
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qa_result: QAAccuracyResult | None = None
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|
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@property
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def all_passed(self) -> bool:
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"""True if all benchmarks pass."""
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passed = True
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|
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if self.extraction_result:
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# F1 should be within 0.05 of baseline (0.958)
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passed = passed and self.extraction_result.avg_f1 >= 0.90
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|
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if self.qa_result:
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# Accuracy should be preserved
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passed = passed and self.qa_result.accuracy_preserved
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|
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return passed
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|
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def summary(self) -> dict[str, Any]:
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result: dict[str, Any] = {"all_passed": self.all_passed}
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|
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if self.extraction_result:
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result["extraction"] = self.extraction_result.summary()
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|
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if self.qa_result:
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result["qa_accuracy"] = self.qa_result.summary()
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|
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return result
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|
|
|
|
|
def run_full_benchmark_suite(
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extractor: Any = None,
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answer_fn: Any = None,
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extraction_samples: int = 50,
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qa_questions: int = 50,
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|
) -> HTMLExtractorBenchmarkSuite:
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|
"""Run the complete HTML extraction benchmark suite.
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|
|
|
Args:
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extractor: HTMLExtractor instance (creates one if None)
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|
answer_fn: Function for QA evaluation (skips QA if None)
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|
extraction_samples: Number of extraction benchmark samples
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|
qa_questions: Number of QA questions
|
|
|
|
Returns:
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|
HTMLExtractorBenchmarkSuite with all results
|
|
"""
|
|
if extractor is None:
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|
from headroom.transforms.html_extractor import HTMLExtractor
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|
|
|
extractor = HTMLExtractor()
|
|
|
|
suite = HTMLExtractorBenchmarkSuite()
|
|
|
|
# Run extraction benchmark
|
|
logger.info("=" * 50)
|
|
logger.info("Running Scrapinghub Article Extraction Benchmark")
|
|
logger.info("=" * 50)
|
|
|
|
try:
|
|
suite.extraction_result = evaluate_scrapinghub_benchmark(
|
|
extractor=extractor,
|
|
max_samples=extraction_samples,
|
|
)
|
|
logger.info(f"Extraction F1: {suite.extraction_result.avg_f1:.3f}")
|
|
logger.info(f"Baseline F1: {suite.extraction_result.baseline_f1:.3f}")
|
|
except Exception as e:
|
|
logger.error(f"Extraction benchmark failed: {e}")
|
|
|
|
# Run QA accuracy evaluation if answer function provided
|
|
if answer_fn:
|
|
logger.info("=" * 50)
|
|
logger.info("Running QA Accuracy Preservation Evaluation")
|
|
logger.info("=" * 50)
|
|
|
|
try:
|
|
suite.qa_result = evaluate_qa_accuracy_preservation(
|
|
answer_fn=answer_fn,
|
|
extractor=extractor,
|
|
max_questions=qa_questions,
|
|
)
|
|
logger.info(f"QA Accuracy (original): {suite.qa_result.accuracy_original_html:.3f}")
|
|
logger.info(f"QA Accuracy (extracted): {suite.qa_result.accuracy_extracted:.3f}")
|
|
logger.info(f"Accuracy preserved: {suite.qa_result.accuracy_preserved}")
|
|
except Exception as e:
|
|
logger.error(f"QA benchmark failed: {e}")
|
|
|
|
return suite
|